Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00087 ATGGGTACTGTGGAGGGTCTTTTAGCATTTGCTTTGGTTCTGAATGTGTGTGTGGTGTGCAATGGAGGCACAAGCAGCTCCTTCGTTAGGAAGGTCGAGAAGACTGTGGATATGCCACTTGACAGCGATGTCTTTACAGTCCCTCCTGGTTACAATGCTCCTCAACAGGTTCATATAACTCAAGGTGACCTTGTGGGGAGAGCAGTGATTGTGTCATGGGTAACGGTGGATGAACCGGGGTCGAGTGAAGTACGTTACTGGCGTGAGAACAGTCACAGGAAGAAGATTGCTGAAGGCAAAGTTGTTACTTATAGGTACTTCAATTACTCTTCTGGGTTTATTCATCACACCACCATCAGCCACTTGGAGTACAACAGCAAATACTACTATGAAGTTGGGCTTACAAACACAACAAGGCAGTTTTGGTTTATGACTCCTCCTGAAATTGGTCCTGATGTGCCATACACATTTGGTCTCATAGGGGATCTTGGTCAGAGTTTTGATTCTAATAAGACTCTTTCTCACTATGAATTGAACCCAAGAAAAGGACAAACTATACTGTTTGTTGGAGACCTGTCTTATGCGGATAACTACCCAAATCATGATAATGTTAGATGGGATACTTGGGGAAGGTTCACAGAAAGGAGTGTTGCTTATCAGCCATGGATATGGACTGCAGGGAACCATGAAATTGATTTTGCTCCAGAAATTGGTGAAACCGTACCATTCAAGCCGTATACCCACCGTTACCGTGTTCCTTATAGAGCATCTCAGAGTACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTCTTGGCCTCATATTCAGCATATGGCAAATATACACCACAATATAAATGGCTTGAAGAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTATAATAGCTACAATTATCACTATATGGAAGGGGAAACGATGAGAGTAATGTATGAGCCCTGGTTTGTGAAGTACAAGGTTGATGTAGTGTTTGCTGGTCATGTTCATGCCTATGAACGATCTGAGCGTGTTTCCAATGTTGCATACAATGTTGTAAATGGTCTTTGCAGTCCTATAAAAGATCAATCAGCTCCTGTATATATAACCATTGGCGATGGAGGAAATCTTGAAGGCTTAGCAACCAATATGACAGAACCACAGCCAGAGTACTCAGCATTCCGAGAGGCCAGCTTCGGACATGCTATTTTTGAGATAAAGAACCGAACTCATGCTTACTACGGCTGGCACCGAAATCAAGATGGAGTTGCTGTGGAGGCTGATTCCCTTTGGTTTTACAACAGATTCTGGCACCCAGTTGATGATTCCACCGTTCATGTTTCACATTAA 1395 0.433 MGTVEGLLAFALVLNVCVVCNGGTSSSFVRKVEKTVDMPLDSDVFTVPPGYNAPQQVHITQGDLVGRAVIVSWVTVDEPGSSEVRYWRENSHRKKIAEGKVVTYRYFNYSSGFIHHTTISHLEYNSKYYYEVGLTNTTRQFWFMTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTILFVGDLSYADNYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETVPFKPYTHRYRVPYRASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVKYKVDVVFAGHVHAYERSERVSNVAYNVVNGLCSPIKDQSAPVYITIGDGGNLEGLATNMTEPQPEYSAFREASFGHAIFEIKNRTHAYYGWHRNQDGVAVEADSLWFYNRFWHPVDDSTVHVSH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00087 464 SUPERFAMILY Metallo-dependent phosphatases 151 458 IPR029052 -
Cca04g00087 464 SUPERFAMILY Purple acid phosphatase, N-terminal domain 36 147 IPR008963 GO:0003993|GO:0046872
Cca04g00087 464 PANTHER ACID PHOSPHATASE RELATED 9 460 IPR039331 GO:0003993
Cca04g00087 464 CDD MPP_PAPs 151 449 IPR041792 -
Cca04g00087 464 Gene3D - 53 149 - -
Cca04g00087 464 PANTHER PURPLE ACID PHOSPHATASE 9 460 - -
Cca04g00087 464 Pfam Calcineurin-like phosphoesterase 156 354 IPR004843 GO:0016787
Cca04g00087 464 Pfam Purple acid Phosphatase, N-terminal domain 54 144 IPR015914 GO:0003993|GO:0046872
Cca04g00087 464 Pfam Iron/zinc purple acid phosphatase-like protein C 380 438 IPR025733 -
Cca04g00087 464 Gene3D - 150 459 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00087 Cca-Chr4 781186 786798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00087 41 437 Miscellaneous Gene Families AT1G13900 24.947 6.31e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00087 K22390 - gmx:100815854 925.62