Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00083 ATGAGGAGCAATCATGTGCGTTTGAACTGTGGCATTACATTGCCTCGTATTGGATTTGGCACTTATTCCTTCCCAAATGATAGGAAGACAACAGAACTTGCTGTCCACAAGGCCCTTGAGATGGGTTATAGGCATTTTGACTCAGCAAAAATATATGGTTCTGAGCCAGCAGTTGGCAAAGCCATAAATGAGGCAATTTGCGTGGGAGAAATAGAGAGAGAAGACATTTTCTTAACATCCAAACTGTGGGGGAGTGATCACCATGATCCCGTTTCTGCATTGAAGCAAACTCTAGAGAATATGGGCATGGAGTACTTGGACATGTACCTAGTGCACTGGCCTGTGAGTTTGAAGCCATGGGTTGACTACCCTGTACCGAATGAAGACGACTTTGAAAAGTTGGACCTTGAAACCACATGGGCGGGGATGGAGAAATGCCTAGAAATGGGGTTGTGTAGGTGCATTGGAGTTAGCAATTTCTCTAGCAACAAGATTGAGTGCCTATTGGATTATGCTTCTACACCTCCAGCTGTAAATCAGGTGGAAATGCATCCAATGTGGAGGCAAGGAAGGTTGAGAAAGACTTGTGGAGATCACAAGATACATGTAAGTGCTTATTCACCACTTGGTGGGCCAGGGAATGCATGGGGATCAACAGCAGTGGTTAATCACCCAATCATTCGATCAATTGCCTTCAAACACAAAGCAACTCCAGCACAGGTTGCATTGAAATGGGGACTATCAAAGGGGTCAAGTATGATTGTGAAAAGTTTCAATCATGGAAGAATGAAGGAAAATATAGGAGCGTTTGATCTGAGACTTGATAATGAGGATATGTTGGAGATTGAGAAATTGGAGGAAGTGAAGATTATGAGGGGGGAGTTTCACGTTAATGATACCACAAGTCCCTACAAAACAATTGAGGAACTTTGGGATGGTGAAATTTGA 948 0.4335 MRSNHVRLNCGITLPRIGFGTYSFPNDRKTTELAVHKALEMGYRHFDSAKIYGSEPAVGKAINEAICVGEIEREDIFLTSKLWGSDHHDPVSALKQTLENMGMEYLDMYLVHWPVSLKPWVDYPVPNEDDFEKLDLETTWAGMEKCLEMGLCRCIGVSNFSSNKIECLLDYASTPPAVNQVEMHPMWRQGRLRKTCGDHKIHVSAYSPLGGPGNAWGSTAVVNHPIIRSIAFKHKATPAQVALKWGLSKGSSMIVKSFNHGRMKENIGAFDLRLDNEDMLEIEKLEEVKIMRGEFHVNDTTSPYKTIEELWDGEI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00083 315 Pfam Aldo/keto reductase family 16 286 IPR023210 -
Cca04g00083 315 ProSitePatterns Aldo/keto reductase family signature 2. 143 160 IPR018170 GO:0016491
Cca04g00083 315 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Cca04g00083 315 PRINTS Aldo-keto reductase signature 96 114 IPR020471 GO:0016491
Cca04g00083 315 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491
Cca04g00083 315 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491
Cca04g00083 315 PRINTS Aldo-keto reductase signature 221 245 IPR020471 GO:0016491
Cca04g00083 315 Gene3D - 3 315 IPR036812 -
Cca04g00083 315 SUPERFAMILY NAD(P)-linked oxidoreductase 6 285 IPR036812 -
Cca04g00083 315 PANTHER ALDO/KETO REDUCTASE 5 313 - -
Cca04g00083 315 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
Cca04g00083 315 PANTHER - 5 313 - -
Cca04g00083 315 PIRSF AKR 1 309 IPR020471 GO:0016491
Cca04g00083 315 ProSitePatterns Aldo/keto reductase family putative active site signature. 254 269 IPR018170 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00083 Cca-Chr4 740119 742049 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00083 - K00002 gmx:100786497 612.453