Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00082 ATGAAGAAGGAAAAGGAGAAGATTGTGAATGTAACAAGCCCTGTGAGTGGCGAAGACAGCGATGATAAGCAAAGCTCTTCCTTTCCCTCCGTCAGATTCTCTTCTCGCAACGGTTCCTCCAAATACGATTTCGTCAAGGTCAAGGTTTGGTTGGGTGACAATGCCGACCACTACTACGTTCTCTCCAGATTCTTGCTCAGCAGAATGCTCACCGTAACCAAGATTCCAAACCATGTAGCTATCAAAATTGCTCTTGAACTCAAGAAGCTGCTCATCGACAACAGCCTTCTCGATGTCTCTCAATCTGACTTGGAAGCCAACTTATTTAAGCTTATGGAGCGGCGGGGATATGGAGAAGAGTACATAAATCGTTACAAGATGATGACAAGATTTCACCATCAGAGAGTTCCGTTAGTAATCCTTGTCTGTGGAACTGCTTGTGTTGGGAAGTCTACTATTGCCACCCTGCTTGCACAGAGGCTAAATTTACCAAATGTATTACAGACAGATATGGTTTATGAATTGTTGCGCACATCAACAGATGCACCATTGGCATCGACTCCTGTATGGGCCAGAGACTTTAGTTCGTCAGAGGAGTTAATAACTGAATTTTGCAGAGAATGCAGGGTTGTTCGTAAAGGTTTGGCTGGTGATCTGAAAAAGGCAATGAAAGATGGGAAGCCAATAATTATTGAGGGAATACATTTGGATCCTAGCATCTATTTAGTGGACGATGAGAATAAATCACCTTCTGGTGTACATTCAGAAAATAAAGTGATAAATCCAGCATCTGTGACAGTAGATGATAGTGCTACTATACAAGAAAAAAATATTCATGAGGGTAGCAGTGATGAGAATAATGGTGGCTCCAAGATTTTGAGCTCTAATGAAGGAGTATCTACTGACCAGGTTGATTCAGTATCAAATTCTATGGCATCCATGGGCCTCATTGAAAGCATCTCTGAACATAAAGGTGCTTCTCTTAGGGAACTGGAGACAGACAAACCTGCTATTAGTAAGGCGAAGTCGGGTCCCAAACCAATAATTGTGCCTATTGTTTTGAAGATGGCTGAATTTGATCATAAGGCGTTACTTGAGGAATGGATCACCTCTCGCACATTTAATGACAAATGTCCAGACCTGGATAATGAGAAGCTTGTAGCCAACTTGAAAACCATACAGGATTATCTGTGCTCATTCACGTCACAGGGGTTGACTGTTGTCAATGTATCGGCAACAACATTTCCTCAAACATTGGATTGGCTGCATGGTTACCTTCTTCAGTGCATCGAGCAAGGTATTAAAGAAAATGTTACACAAGTAGTTGCAGCATAG 1335 0.4202 MKKEKEKIVNVTSPVSGEDSDDKQSSSFPSVRFSSRNGSSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKIALELKKLLIDNSLLDVSQSDLEANLFKLMERRGYGEEYINRYKMMTRFHHQRVPLVILVCGTACVGKSTIATLLAQRLNLPNVLQTDMVYELLRTSTDAPLASTPVWARDFSSSEELITEFCRECRVVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLVDDENKSPSGVHSENKVINPASVTVDDSATIQEKNIHEGSSDENNGGSKILSSNEGVSTDQVDSVSNSMASMGLIESISEHKGASLRELETDKPAISKAKSGPKPIIVPIVLKMAEFDHKALLEEWITSRTFNDKCPDLDNEKLVANLKTIQDYLCSFTSQGLTVVNVSATTFPQTLDWLHGYLLQCIEQGIKENVTQVVAA 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00082 444 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 19 438 - -
Cca04g00082 444 MobiDBLite consensus disorder prediction 1 35 - -
Cca04g00082 444 MobiDBLite consensus disorder prediction 283 305 - -
Cca04g00082 444 MobiDBLite consensus disorder prediction 277 305 - -
Cca04g00082 444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 242 IPR027417 -
Cca04g00082 444 Pfam AAA domain 140 248 - -
Cca04g00082 444 Coils Coil 443 444 - -
Cca04g00082 444 Gene3D - 139 255 IPR027417 -
Cca04g00082 444 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 19 438 - -
Cca04g00082 444 MobiDBLite consensus disorder prediction 13 35 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00082 - - gmx:100812099 788.104