Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00072 ATGCGGAGAGCGTCATTCAGCAGCTTGCGACGGAGGACGGAACAGGTCAAAGCCACTTGCGTGTTTGCCGAACAAGAGGTCGAGTACGAGCTACGTTTCATTATTGATGTGGTCAGGCAGCGTTTGAAATCCGTCACAGTTTCTCAAGGCACTCCAAGGATTGAATTATGGCAAACTCCATTTTATGATGTAAAGGATCTACAAGATCTTCCTCTTTCATATGACGAGTTTAAGAAACTTCGATTCCCCGTGACTACACCACTTCAGCTGTCAGAGTCAACTTTACCTGGTGCAGAAATGGAACTGGACTGGGGTGTTCTTCCCTCGTATGATGATGTAAAGGGCTTTATGACTAGCAACCAGCGGAAATCAGGAGAGAATTGGAGTTTAATTAAGGAGACATCAGCTGAAACTGTTTTACGCAGAAAAGTATTGAAGTCTGGCGATAGCATTGAAAGAAGTTCTGGCTTTAGGCAAACACAATCAAGGGAACGTAATGGATCTGTTTTTGTGACACAAAAAGGAAGTGTTGTAGGAGGTAGTACAAACAATGTACTGAATGCATTGGCTGCATATCTAAGATATTTGGAGGGAACAGCTCGTGATGACTGGCAAGAGGTACACGAAAAAGTGCGTGCTTCTGAAAGTCGGAGTGGAGCATCATTCAATGAACTATTTGGTCCTGCCCTATCTCTTGGCCTTATATCTAGAAGAAGAGTACATTATGAAGCTATCAAATATGAGAAAGAACGAAATGCGGGTTTCTTATCACCCTTTGGATATTCAGCTGCTACAATTGCAGCAGCAGTTGACGCTGTGTGCTCAATGGAGTGGTATTGGCTTGTGGCCTTGAGAAATCAGATAAATAATGAGGGAATACACTCAACGCGGATATGGAAATGGAAAGGATTTCTTATCCAGTATACAGTTGCTGGTGAAGATGGTCCTGCTGTTCTTCTTGTGCATGGTTTTGGTGCCTTCTGGGAGCATTACCGTGACAACATACGTGGTTTAGCTGAATCTGGAAATAGAGTTTGGGCTATTACTATGTTAGGATTTGGCAAATCAGAAAAGCCAAATGTTGTTTATACCGAACTCTTGTGGGCTGAACTATTGAGAGATTTTATTGTTGATGTTGTGGGTGAACCAGTCCACCTTGTTGGCAACTCAATTGGCGGTTATCTTGTTGCTATTGTTGCTAGTATTTGGAGTGTTTTGATCAAATCCATTGTCTTGATCAATAGTGCGGGCAATGTCATCCCAAGTTATTCTTACATACCATTGTCTGGAATTCAGGATAGACAAACTTCAGGGGCTTCCTGGTTGGGTTCTCGCATTCTTCTATTCTACTTGAGGCTAAGAACTCAAGAAATACTTAAGAAATGTTATCCAACTAGAGTTGAAAGAGTAGATGGTTCGCTCATAAATGAAATACTAAGAGCTGTATCCTCTACTTTTAGAATCTAA 1467 0.4185 MRRASFSSLRRRTEQVKATCVFAEQEVEYELRFIIDVVRQRLKSVTVSQGTPRIELWQTPFYDVKDLQDLPLSYDEFKKLRFPVTTPLQLSESTLPGAEMELDWGVLPSYDDVKGFMTSNQRKSGENWSLIKETSAETVLRRKVLKSGDSIERSSGFRQTQSRERNGSVFVTQKGSVVGGSTNNVLNALAAYLRYLEGTARDDWQEVHEKVRASESRSGASFNELFGPALSLGLISRRRVHYEAIKYEKERNAGFLSPFGYSAATIAAAVDAVCSMEWYWLVALRNQINNEGIHSTRIWKWKGFLIQYTVAGEDGPAVLLVHGFGAFWEHYRDNIRGLAESGNRVWAITMLGFGKSEKPNVVYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYLVAIVASIWSVLIKSIVLINSAGNVIPSYSYIPLSGIQDRQTSGASWLGSRILLFYLRLRTQEILKKCYPTRVERVDGSLINEILRAVSSTFRI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00072 488 Pfam Alpha/beta hydrolase family 318 421 IPR000073 -
Cca04g00072 488 PANTHER DNA PHOTOLYASE 11 482 - -
Cca04g00072 488 SUPERFAMILY alpha/beta-Hydrolases 296 425 IPR029058 -
Cca04g00072 488 Gene3D alpha/beta hydrolase 293 487 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00072 Cca-Chr4 637282 642704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00072 318 435 Acyl Lipid Metabolism Gene Families AT1G64670 33.871 7.01e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00072 - - gmx:100813721 838.18