Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00051 ATGTGGAGACGCGCAACCAAATCATCCCTTTTCCTTCGCCTCCTGAAACCTTCTAAACAAAACGCTTCGCTCTCCCAAAGATTCACCAATGGATTCGCCTTCCACATGCACACGCGAACGCACTTCCAGGAAAAGCATGGAGTTTTCCCCAAACAAGTAGCTCCGCTTATAACTTTTGTTTTAGGAGGCCCTGGTAGTGGAAAAGGTACGCAATGTGCAAAAATTGTTGAAACCTATGGATTTAATCATCTGAGTGCTGGAGATCTTTTGAGAAGGGAGATGAATTCTGATAGTGAATATGGCTCAATGATTCTGAATACAATTAGAGAAGGAAGTATCGTTCCATCAGAAGTGACTGTCAAATTGATTCTTAAAGAGATGAAATCTAGTGACAATCATAAGTTTCTCATTGATGGTTTCCCTAGAAGCGAGGAGAACCGGAAAGCTTTTGAACAAATTATTGGAGCAGAACCACGTATAGTACTTTTCTTTGATTGCCCTGAAGAAGAGATGGTGAAACGTTTGCTGCGCCGTAATCAGGGTCGAATTGATGACAACATAGATACAATCAAGAATCGTCTTAAAGTATTTGAGGCATTAAATCTTCCTGTGATTGATTATTATGCCAAGAGAGGGAAACTTTACAGGATCAATGCAGTGGGAACAGCAGACGAAATATTTGAGCAAGTTCGGCCAGCTTTTGAAGCATGTGAGCACGAGGCTAAATGA 729 0.4129 MWRRATKSSLFLRLLKPSKQNASLSQRFTNGFAFHMHTRTHFQEKHGVFPKQVAPLITFVLGGPGSGKGTQCAKIVETYGFNHLSAGDLLRREMNSDSEYGSMILNTIREGSIVPSEVTVKLILKEMKSSDNHKFLIDGFPRSEENRKAFEQIIGAEPRIVLFFDCPEEEMVKRLLRRNQGRIDDNIDTIKNRLKVFEALNLPVIDYYAKRGKLYRINAVGTADEIFEQVRPAFEACEHEAK 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00051 242 ProSitePatterns Adenylate kinase signature. 135 146 IPR033690 -
Cca04g00051 242 PANTHER NUCLEOTIDE KINASE 57 236 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00051 242 PANTHER UMP-CMP KINASE 57 236 - -
Cca04g00051 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 234 IPR027417 -
Cca04g00051 242 Hamap UMP-CMP kinase [CMPK1]. 55 237 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Cca04g00051 242 CDD ADK 59 226 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00051 242 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 57 234 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Cca04g00051 242 Hamap Adenylate kinase [adk]. 56 235 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00051 242 Pfam Adenylate kinase 60 212 - -
Cca04g00051 242 PRINTS Adenylate kinase signature 59 72 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00051 242 PRINTS Adenylate kinase signature 87 101 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00051 242 PRINTS Adenylate kinase signature 135 151 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00051 242 PRINTS Adenylate kinase signature 182 197 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00051 242 PRINTS Adenylate kinase signature 199 213 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00051 242 Gene3D - 50 236 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00051 Cca-Chr4 476141 480874 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00051 K13800 - gmx:100806842 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00051 04 476141 480874 Cca04g00051 04 476141 480874 ECH