Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00049 ATGGTTCTTCTACAGCTAGATCCATTTCTCAATGAACTCACCAGCATGTTTGAGCGCAGCACTGAAAAGGGCTCTGTTTGGGTTACTCTTAAACGATCATCTTTGAAATCTAAGGTGCAGAGGAATAAATTGGCGACTGCTGGTGAATCAATTGAGTACAGATGCCTTATACGTGCTACTGATGGGAAAAAGACAATTTCTACTTCGGTTGGACAGAAGGATCACCAGCGTTTTCAAGCTTCTTATGCAACTATATTGAAGGCTCATATGACTGCTCTAAAGAAGAGAGAAAGGAAAGACAAGAAGAAGCCGGCGGAGGCAGATAAAAGAGAAGGGAGTTCGAAGAGACCGAAGAAGTCTTGA 363 0.427 MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKLATAGESIEYRCLIRATDGKKTISTSVGQKDHQRFQASYATILKAHMTALKKRERKDKKKPAEADKREGSSKRPKKS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00049 120 MobiDBLite consensus disorder prediction 92 120 - -
Cca04g00049 120 PANTHER - 2 119 - -
Cca04g00049 120 SUPERFAMILY Signal recognition particle alu RNA binding heterodimer, SRP9/14 1 96 IPR009018 GO:0006614|GO:0008312|GO:0048500
Cca04g00049 120 Gene3D Signal recognition particle alu RNA binding heterodimer, srp9/1 1 120 IPR009018 GO:0006614|GO:0008312|GO:0048500
Cca04g00049 120 PANTHER SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN 2 119 IPR003210 GO:0005786|GO:0006614|GO:0008312|GO:0030942
Cca04g00049 120 MobiDBLite consensus disorder prediction 99 114 - -
Cca04g00049 120 Pfam Signal recognition particle 14kD protein 4 93 IPR003210 GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00049 K03104 - gmx:100526909 213.772