Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00047 ATGTGCCCAACCCCATCGCCGctcctcccccttctcctcctcctcctcGCCGTGGCTCCGGCCTCGGCATGGCGTCCGTGGCCGCCGCGCAACAACAAAATGAACACCACCGATTACGCCTTCGGAGACTCCAAGAAATACGAGGGTTCCTCGGAGTTCGTGAAGCTGAGGTACCACATGGGACCGGTTCTCACCAGCAACATCACCGTCCACACCATCTGGTACGGAAAATGGGAGAAAAGGCAGAAGAAGATCATCCGCGAGTTCATCAACTCAATCTCGGCAACGGCGGCGCCGCACCCATCGGTGGCCGGGTGGTGGCGCACCGTGGAGCTGTACACGGACCAGACCGGATCCAACATTTCGAAAACGGTCCGGCTGGGGGAGGAGAAAAACGACCGGTTGTACTCGCACGGGAAATCCCTGAGCCGTCTCTGGATCCAGTCGGTAATAAAGAGCGCCATCACAGCGAAAACGAGGCCCTTGCCGATTAACCCTCGGAGCGGGTTATATCTTGTGCTGACAGCCGATGACGTGTACGTGCAGGACTTCTGCACGTCGGTGTGTGGGTTCCACTACTTCACGTTTCCCTCGCTGGTGGGTTACACGCTCCCCTACGCCTGGGTGGGTAACTCCGCCAGGTTCTGCCCCGGGCAGTGCGCCTACCCCTTCGCCGTCCCCCCCTACATCCCCAACCGAAAGCCCTTCAAGTCCCCTAACTCCGACGTTGGAGTCGACGGCATGATCAGCGTCATTGGCCACGAGATGGCTGAGCTTGCCACCAACCCCCTCGCCAACGCTTGGTACGCCGGCCAGGACCCCTCTTTCCCCGTCGAGATTGCCGATCTCTGCGAGGGCATTTACGGCACCGGCGGCGGTGGCTCCTACACCGGCCAGGTCCTCGACGCTCGAGATGGCGCCACGTATAACATGAATGGCATCCGACGGCGCTTCCTCGTTCAGTGGGTGTGGAGCCACGTTCTCAATTACTGTACTGGACCTAATGCTCTTGATCACTGA 1020 0.5833 MCPTPSPLLPLLLLLLAVAPASAWRPWPPRNNKMNTTDYAFGDSKKYEGSSEFVKLRYHMGPVLTSNITVHTIWYGKWEKRQKKIIREFINSISATAAPHPSVAGWWRTVELYTDQTGSNISKTVRLGEEKNDRLYSHGKSLSRLWIQSVIKSAITAKTRPLPINPRSGLYLVLTADDVYVQDFCTSVCGFHYFTFPSLVGYTLPYAWVGNSARFCPGQCAYPFAVPPYIPNRKPFKSPNSDVGVDGMISVIGHEMAELATNPLANAWYAGQDPSFPVEIADLCEGIYGTGGGGSYTGQVLDARDGATYNMNGIRRRFLVQWVWSHVLNYCTGPNALDH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00047 339 Pfam Phosphate-induced protein 1 conserved region 56 333 IPR006766 -
Cca04g00047 339 PANTHER PROTEIN EXORDIUM-LIKE 3 8 337 - -
Cca04g00047 339 PANTHER PROTEIN EXORDIUM-LIKE 5 8 337 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00047 Cca-Chr4 440284 441303 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00047 - - gmx:100813279 624.009