Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00041 ATGGATTTAACTTTTGATGCCGACATTGTGATCGTGGGAGGTGGTATATGTGGCCTTGCAACTGCCCTTGCCCTTCACAGGAAGAGAATAAAAAGCTTGGTGTTAGAAAGATCAGAGAGTTTGCGAGCAACAGGAGCAGCTATAATAGTACAGGCAAATGGCTGGCGTGCACTTGATTTGATTGGCATTGGCTCAACACTTAGAGAAAGTGCTATTCGAATACTAGGGGGAAGATTCATATCTCTTAACGAGACTGCACCATTGGAATTTTCATTTGGGGTTAGTCAGGAAATTCGCTGCCTAAAGCGTACTGATCTGATCAAAGCCATGGCTGATAATTTACCAATAGGGACTGTACGTACCAATTGTCAAGTTCTTTCCATTGAAATAGATCCTTTAACACATTATCCACAACTTATGCTTAGCAATGGAAGTATCCTTCAAGCTAAGGTTGTGATTGGATGTGATGGCGTGAACTCTATTATTGCAAGTATGTTTGGGTTACACCGAACCAAGCTCTTGATCTTCTCAACATGTGTTGCACGAGGCTTCACAAATTATCCAAATGGTCACCAATATGGCAGTGAGTTTGCTGTGATAAACAAAGCTCAAGTCCAGCTCGGAAGGTTGCCAATATCTGACAAACTTGTTTATTGGTTTGTCACAAGGCTTAGGACTCCTCAAGATGCAACAAATTGGAAAGACCCGATTCTTATTAGACAATCATTAATGGAATCAATGAAAGGTTTCCCAGAAGAGGTAGTGGACATGATACGAAATTGCAAGTTGAGTGACTTGCACCTCACTGAGTTGAAGTATAGAGCACCGTGGGAATTGGTCTTTAACAACTTGAGGGATGGAACAGTAACAATTGCTGGTGACGCAATGCATGCGATGGGGCCATTCATTGCACAGGGTGGCTCAGCCTCCATTGAAGATGCCATTGTTATTGCTAAATGCTTGTCACAAAAGATGCACAATACTAAGAAAAAGGAAATTAACGTTAGAGTTGCAAAGGAAGCATTTGATGAATATGTGAAAGAAAGGAGAAGGAGACTCTTTTGGCTCTCTTTGCATTCATTTCTTATTGGGAAGAAGCTTGACACAAAATCATCCATAGTGAGATTTATTATCCATGCAATCGTGTCCGTTTTTTTTACAGACCCTAACTGGCATACTCACTATCATTGTGGAAATCTATGA 1203 0.4098 MDLTFDADIVIVGGGICGLATALALHRKRIKSLVLERSESLRATGAAIIVQANGWRALDLIGIGSTLRESAIRILGGRFISLNETAPLEFSFGVSQEIRCLKRTDLIKAMADNLPIGTVRTNCQVLSIEIDPLTHYPQLMLSNGSILQAKVVIGCDGVNSIIASMFGLHRTKLLIFSTCVARGFTNYPNGHQYGSEFAVINKAQVQLGRLPISDKLVYWFVTRLRTPQDATNWKDPILIRQSLMESMKGFPEEVVDMIRNCKLSDLHLTELKYRAPWELVFNNLRDGTVTIAGDAMHAMGPFIAQGGSASIEDAIVIAKCLSQKMHNTKKKEINVRVAKEAFDEYVKERRRRLFWLSLHSFLIGKKLDTKSSIVRFIIHAIVSVFFTDPNWHTHYHCGNL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00041 400 Gene3D - 8 374 IPR036188 -
Cca04g00041 400 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Cca04g00041 400 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 - -
Cca04g00041 400 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 - -
Cca04g00041 400 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 - -
Cca04g00041 400 Pfam FAD binding domain 7 332 IPR002938 GO:0071949
Cca04g00041 400 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 5 400 - -
Cca04g00041 400 SUPERFAMILY FAD/NAD(P)-binding domain 7 390 IPR036188 -
Cca04g00041 400 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 5 400 IPR044560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00041 Cca-Chr4 412595 419057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00041 1 400 Miscellaneous Gene Families AT5G05320 33.575 5.95e-73 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00041 - - gmx:100775200 647.506