Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00035 ATGAGGAACAAGGGTGGATGGAATCATGGGAGCACAGCAGCAGCAATGCTTGCATTGTTGCTATGCTTGGATGGGATTGCAGAGGTTAACTCACAGACACAGAAGGTACCTGCTATGTTTGCGTTTGGAGACTCATTGCTTGAAGTTGGCAACAATAACTTCCTCAACACCATCGCAAGGTCAAATTACTATCCTTACGGCATCGACTTCAACGGGGGTTCTACTGGCCGATTTTCTAATGGCAGATCCCTCATTGACTTCTTTGGAGCAATGCTGGGTGTTCCTTCTCCACCACCTTTTGCAGACCCCTCCACGACTGGAGCTAGAATACTTTCTGGTGTGAATTATGCATCAGCTGCTTCCGGCATTCTTCAAGAGTCAGGGAGACACTATGGTGATCGGTATAGCCTGGGCCAGCAAGTCCAGAACTTTGAGAACACATTGAATCAGTATAGGACAATGATGAACACAACTGCATTGAATCAGTTCTTAGCCAAGTCTTTAACAGTTGTGGTGACCGGAAACAATGACTACATCAACAACTACCTCTTGCCCGGGTTATATGGCACCAGTTATAATTATACTACCCAACAGTTTGGCAATCTTCTTGCTGATAGCCTTGTGCGACAAGTTTTGACACTACATAGATTAGGATTAAGGAAGTTCTTCGTAGGAGGAATTGGGCCACTGGGTTGCATCCCGAATCTTCGAGCCACACTTTTGGCCCCAGCAGGAAGATGCGTGGACTTTGTTAATCAGATGGTTGGAACCTTCAATGAAAGGCTTCGATCAATGGTGGACCAACTGAACAAACAATATCCCGATGCTATCTTTGCGTACGGTAACACTTACCGTGTCCTTGGCGATATCCTAAATAACCCCGCGGCCTATTCGTTTAATGTTGTGGATAGAGCTTGTTGTGGGATTGGAAGGAACCGAGGTCAATTAACGTGCCTCCCATTGCAATTTCCATGCATAGTAAGAAATCAGTACGTGTTTTGGGATGCCTTTCACCCTACAGAATCTGCAATATATGTCTTTGCCTGGAGAGCTGTTAATGGACCACCCGATGATAGTTACCCAATTAATATACAACAAATGGTTAACATTTGA 1113 0.4501 MRNKGGWNHGSTAAAMLALLLCLDGIAEVNSQTQKVPAMFAFGDSLLEVGNNNFLNTIARSNYYPYGIDFNGGSTGRFSNGRSLIDFFGAMLGVPSPPPFADPSTTGARILSGVNYASAASGILQESGRHYGDRYSLGQQVQNFENTLNQYRTMMNTTALNQFLAKSLTVVVTGNNDYINNYLLPGLYGTSYNYTTQQFGNLLADSLVRQVLTLHRLGLRKFFVGGIGPLGCIPNLRATLLAPAGRCVDFVNQMVGTFNERLRSMVDQLNKQYPDAIFAYGNTYRVLGDILNNPAAYSFNVVDRACCGIGRNRGQLTCLPLQFPCIVRNQYVFWDAFHPTESAIYVFAWRAVNGPPDDSYPINIQQMVNI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00035 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 22 369 - -
Cca04g00035 370 Pfam GDSL-like Lipase/Acylhydrolase 40 343 IPR001087 GO:0016788
Cca04g00035 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 22 369 - -
Cca04g00035 370 CDD SGNH_plant_lipase_like 37 355 IPR035669 -
Cca04g00035 370 Gene3D SGNH hydrolase 26 354 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00035 Cca-Chr4 371389 373188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00035 36 369 Acyl Lipid Metabolism Gene Families AT4G10950 35.714 8.05e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00035 - - gmx:100782184 610.142