Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00031 ATGAGGTCTTCTGGAGCAAATAATGCCCCAACTCAACAGGAACCATTCATTCGTACTAGAGAGAATCCATTCTTTGATGGCCTTCTAAGATCCGGTGATATCGGTGAAACCAGACCCAAAAGCTTTATCTCAGATACAGATATGTCTGAAGATGTTATAGAGTTGTCACTGGATAATTCAGCAGTCTCAGGATTCAACTCTGAATCTTTTGAACATTCTTCATCTGAGAGGTGGTTAAAAACAAGCAAAATTGCTCCATTTATACCACTGGATATTCAATCTGAGCTTATTGAACCGGCTCATCAAAAACAGATTGAATATGGCCATAGCCCTGTCCAAACTCCTGAAGCTGATGAAAAGCATCAGGCCTTACAATCATCACCTGCTATGCCCAATACAGGAAAAACATACACTGTCAGAAGAAGAAAAGAAAAGCTATCGAGTATTCTACTTCCACTATCTGCAGCTTCATACTATAATGGAGTATCACCCGAGATGGAAATTGTTGAATCATGTGAAAGCATTGGCAAGCTAAATGCATATTTGAAAGCAAGAAAGGATGATGTCAATGCTGGTGTGCCTGGGAAATTCTTACACGCTGTAATGGGTTCAGATGGTGCTGACGTGGGAACTGTGGCTTCGATCATCATGTATTCCTTCTACCTAACAGTAACTTCAGAAAGCGATCAATTCTGCACAGTACCAATTATAAACATTAACAGGGCAAATCTTAGCTCAAATGTTGAACTCAAGTGGTTGCTTGATTCATGTCATATTGATCAGTCATCCTTAATTTTTGCAGATGAGATTGATCTGTCATACTATGATCTATTTGGAAGTCTTAAGATAGTACTGTTGACGGGAAGCAGGATTGCCAGTAAGCAAGAGAAATTGAAGCAGGCCGTGGTTGAAATTTTTCACTGCGAAAAGGGTGAGACAATATATCCATGGGTTAAAACTGTCACAACAGGAGAGGAAAGCTCTTGTTGCACCGCCATAGCAGACAAATTTGCAAGTTTTTCGCCTGAAATTTTGGCTAGCAGATCATTCAGTAAACTTCTGCTAGCTGGCATCCTTTTGGATACTGCCAATCTAAGGGACCCTCGATGCACCTCAAAAGATAAGTACATGGCTTCACTATTGATAAATGGTGCTGGTCGTTATGGATGCAATGGCCTTTACCAATTATTGAGGTACAAAATGCATGATCTTTCCTCCCTCCAAGTAGCGGATATCTTGAGAAGAGATTTTAAGAAGTGGACAGGACAAGAAAGTCCGGATTCAAGATCAGAGCAAATTGGCATGAGTTGTATCGGAATTTCAATTGGACAGCTTCTTTCTCATGCTCAAAATCTAGCACAAGAAATTAAGTTCTTTCAGTTATCGGAGAAACTTCGAGCACTTATTGTCGTTTCGGGGTATTACAATGATGAAAAGAACTTCAAGAGAGAAGTTTTAATATCTTCGGAATCTGCAAAGCTATTGGAGAGTTTGCTCTTTTTCTTCGATTTCAATGCTTCCCGTCTGCCACTCAAAAGTTTGCACTTTCCAGGTCTGAAAAATGAGATGAAAGCGTATGAGATCGATAAGATTACATCAAGAAAAATAGTAGAGCATCTGATTCAAGAGTTCGTCGGAATACCAAAAGCCTAA 1653 0.3981 MRSSGANNAPTQQEPFIRTRENPFFDGLLRSGDIGETRPKSFISDTDMSEDVIELSLDNSAVSGFNSESFEHSSSERWLKTSKIAPFIPLDIQSELIEPAHQKQIEYGHSPVQTPEADEKHQALQSSPAMPNTGKTYTVRRRKEKLSSILLPLSAASYYNGVSPEMEIVESCESIGKLNAYLKARKDDVNAGVPGKFLHAVMGSDGADVGTVASIIMYSFYLTVTSESDQFCTVPIININRANLSSNVELKWLLDSCHIDQSSLIFADEIDLSYYDLFGSLKIVLLTGSRIASKQEKLKQAVVEIFHCEKGETIYPWVKTVTTGEESSCCTAIADKFASFSPEILASRSFSKLLLAGILLDTANLRDPRCTSKDKYMASLLINGAGRYGCNGLYQLLRYKMHDLSSLQVADILRRDFKKWTGQESPDSRSEQIGMSCIGISIGQLLSHAQNLAQEIKFFQLSEKLRALIVVSGYYNDEKNFKREVLISSESAKLLESLLFFFDFNASRLPLKSLHFPGLKNEMKAYEIDKITSRKIVEHLIQEFVGIPKA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00031 550 Pfam DHHA2 domain 400 535 IPR004097 GO:0005737|GO:0016462
Cca04g00031 550 SUPERFAMILY DHH phosphoesterases 199 472 IPR038763 -
Cca04g00031 550 PANTHER EG:152A3.5 PROTEIN (FBGN0003116,PN PROTEIN) 62 548 - -
Cca04g00031 550 Gene3D DHHA2 domain 403 547 IPR038222 -
Cca04g00031 550 Gene3D - 174 398 - -
Cca04g00031 550 PANTHER BNIP - RELATED 62 548 - -
Cca04g00031 550 MobiDBLite consensus disorder prediction 1 22 - -
Cca04g00031 550 MobiDBLite consensus disorder prediction 1 18 - -
Cca04g00031 550 SMART DHHA2_2 394 541 IPR004097 GO:0005737|GO:0016462
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00031 Cca-Chr4 316846 327431 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00031 K01514 - gmx:100802064 882.863