Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00028 atgggttgcagcagcctcaattcatctatttggttctcctctccaaatccaaatccaaatccaaattcaaattcaattcaaactcaaattaacaataagcCTCGTCCATCTTCTTTGTCCGTTAATCCACAACGCCAACGACATCGCCCTTGTCGTTTCTTTTGCGGCGACTTTCGATCCCCTTTCGCTCCCAACGCCGTCGATCCTCCTTCTCTGATTGTGTCCAAAGTCAATGTCATGATTTCTGGTGCTCCTGCTTCTGGTAAAGGAACCCAGTGCCACTTCATCACCAACAAGTACGGTTTGGTGCATGTTGCTGCTGGGGATTTACTTAGAGCTGAAATTTCCACTGGAAGTCAAAATGGAAAGCGAGCCAAACAATATATGGAGAAGGGACAGTTGGTTCCTGACGAAATTGTTGTCATGATGGTCAAGGACCGTCTCCTGCAACCAGATTCTAAAGAGAATGGTTGGCTTTTGGATGGATATCCCAGGAGCTTATCACAAGCTACTGCGCTTAAAGGATTTGGCTTTGAACCTGATATTTTTCTTCTTCTAGAGGTTTCTGAAGATGTTCTTGTCGAGAGAGTAGTTGGCCGGAGATTAGATCCTGTTACTGGGAAGATATATCACTTGAAATATTCTCCTCCTGAGACAGAAGAAATTGCAGCAAGACTTACCCAACGCTTTGATGATACCGAAGAAAAGGTGAAGTTGCGATTGAACACCCATCATCAAAACGTGGAGTCAGTCATTTCCATGTATAATGATATAATTGTTAAGATTAATGGAAATGTCTCAAAGGAGGAAGTATTTGCTCAAATTGATAGTGCCCTGACAAGTCTTGTAGAGCAAAAGAAAGCTGCTTCAGGATCTGTGGCAGCATAG 888 0.3885 MGCSSLNSSIWFSSPNPNPNPNSNSIQTQINNKPRPSSLSVNPQRQRHRPCRFFCGDFRSPFAPNAVDPPSLIVSKVNVMISGAPASGKGTQCHFITNKYGLVHVAAGDLLRAEISTGSQNGKRAKQYMEKGQLVPDEIVVMMVKDRLLQPDSKENGWLLDGYPRSLSQATALKGFGFEPDIFLLLEVSEDVLVERVVGRRLDPVTGKIYHLKYSPPETEEIAARLTQRFDDTEEKVKLRLNTHHQNVESVISMYNDIIVKINGNVSKEEVFAQIDSALTSLVEQKKAASGSVAA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00028 295 TIGRFAM adk: adenylate kinase 78 279 IPR006259 GO:0004017|GO:0005524|GO:0016776
Cca04g00028 295 CDD ADK 78 271 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00028 295 ProSitePatterns Adenylate kinase signature. 158 169 IPR033690 -
Cca04g00028 295 PANTHER ADENYLATE KINASE 8 14 286 - -
Cca04g00028 295 PANTHER NUCLEOTIDE KINASE 14 286 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00028 295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 281 IPR027417 -
Cca04g00028 295 Pfam Adenylate kinase 81 257 - -
Cca04g00028 295 Gene3D - 74 293 IPR027417 -
Cca04g00028 295 PRINTS Adenylate kinase signature 158 174 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00028 295 PRINTS Adenylate kinase signature 108 122 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00028 295 PRINTS Adenylate kinase signature 229 244 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00028 295 PRINTS Adenylate kinase signature 80 93 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca04g00028 295 MobiDBLite consensus disorder prediction 1 45 - -
Cca04g00028 295 Hamap Adenylate kinase [adk]. 77 280 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00028 Cca-Chr4 302247 304781 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00028 K00939 - gmx:100784319 424.861