Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00025 ATGGGACTTCCTCAGTCATGTCAACTATATGAAGTAGAGGAAGAGAGGGTTGGTGTGCCTGTAAAGGGAGGATTGTATGAGGTAGATTTGATTCAGAGACATTGTTTCCCTGTTTATTGGAATGGAGAGAACCGGCGCGTCCTAAGAGGCCATTGGTTTGCTCGTAAAGGGGGCCTCGATTGGCTGCCAATTCGTGAAGATGTTGCTGAACAACTAGAGATTGCTTATCGTAGTCAGGTTTGGCACCGTAGAACGTTTCAACTGTCAGGACTTTTTGCTGCTCGAGTTGATTTGCAAGGCTCCACCCAAGGTCTGCATGCCCTTTTCACGGGAGAAGATGATACCTGGGAAGCCTGGCTAAATGTTGATGCTTCTGGCTTTTCTAGTTTTGTCAGCTTTGCTAGTAATGGAATCAAGCTTAGGCGTGGTTACTCTCCATCAAATTCACCAAAACCAACCCAGGATGAACTAAGGCAACAGAAGGAGGAGGATATGGATGATTATTGTTCACAGGTCCCTGTTCGACACTTGGTATTTATGGTTCATGGGATTGGTCAAAGATTGGAAAAATCCAATTTGGTTGATGATGTGGGCAATTTCCGGCATATTACAGCAAGTCTTGCAGAGCAGCACCTTACTCCTCATCAACGTGGCACTCAAAGGGTCCTCTTTATCCCATGCCAGTGGAGAAAAGGTTTGAAGCTGAGTGGTGAAACTGCTGTTGAAAAAATAACTTTGGATGGAGTGCGGGGATTGCGAGTCACACTGAGTGCAACTGTTCATGACGTGCTATACTACATGAGTCCAATTTATTGTCAAGACATAATTGACTCGGTATCCAACCAACTGAATCGATTATATTTGAAGTTTCTCAAAAGGAATCCTGGATATGATGGCAAGGTTTCATTATATGGTCATTCTTTGGGAAGTGTCCTCTCATATGATATCCTCTGCCATCAAGTTAATCTATCATCCCCATTTCCGATGAATTGGATGTATAAAGAACATGATGAAAATGGGGAATCACTCCCTGATAAGGAAAGTCATCATGTGCGGAACTCACCAATCAATCAGGATTACACATTCAGTATGGTGAGCCCCTGTGAAGAAAATAAGAGTACACAACAGACTACTTCAGAAATGGAGGCAGAATATTCCGAGGAGCCCTCGGTTTTAGGCCCTGCATTATCAAGTTTAGAAGGATTTACTGCAGAACCTAATTCTCTAGAACTAAGTAACAAGGGAGATGTTTCTGAGTTGCGTTCTGATTCCAGTGACACATGTTTTGAGAAAATGGGTGTATTGGATAAACCCGAGAGCGTGGATGTTGGCCTGACAGTGGATAAGGATGAAAGTGAAGTTACAAGCAACAAAGATGAAGTAATCAAGAAGCTCAGAGAAGAGATTGATTCATTGAAAGCCAATCTAGCTGAACTGGAATCACATCATAGCAATAATCATACTGAGGAAGTGTTACATTCTGTACCAAAGATATCTAAAAAGGTGCCTCCCATAAAAGATGCAGCAAAGAGTTATACTCCATATATCAAGTACACCAAGCTTCAATTCAAGGTTGATACATTCTTTGCTGTTGGATCCCCCCTTGGTGTATTTCTTGCACTTCGTAATATCCGGATTGGCATTGGCAGAGGCCAAGAATATTGGGAGCAAGAAAATATAAGTGAGGAGATGCCAGCTTGTCGGCAGATGTTCAACATTTTTCACCCCTTTGATCCAGTAGCATACAGGGTAGAGCCACTTGTCTGCAAAGAATACGTTAGCCAACGACCTGTTTTGATTCCGTACCACAGAGGAGGAAAAAGGTTGCATATTGGATTTCAGGAATTTACTGAAGACCTAGCAGTTCGAACTCACGCAATAAAGAATTATATGAAATCTGCAAGGGATAAGGTAATCACAATTTGTCAGTCGAGGAAAATGGAGAACATGGAAGGGGAGAGTTCTGAAGAGGAAGAAGAGCCATCATATGGATCTTTTATGATGGAGAGGCTGACAGGAAGCAAGAGTGGACGAATTGATCACACGCTTCAGGACAAGACCTTTGAGCATCCATATCTGCAAGCCATTGGAGCACACACAAACTATTGGCGGGATTATGATACCGCTCTTTTCATATTGAATCACTTGTATCGAGATATACCAGAAGACCGCGATTCGTCGATTGTATCTAACGAAGACAACTCAAAATATGAGAGTACCTCTGCTGGTTGGCATGAACCGAGAAACACTGCTGAGGAAGATCTTCCGTTGACTTTCTCCGACAATGTTGTGGTCAGAAGCTTCTCGAGCAAAGCTAAGAAGATTCTGCAGAAGCGCACTGAGTCTAATTTCTAA 2355 0.4276 MGLPQSCQLYEVEEERVGVPVKGGLYEVDLIQRHCFPVYWNGENRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFQLSGLFAARVDLQGSTQGLHALFTGEDDTWEAWLNVDASGFSSFVSFASNGIKLRRGYSPSNSPKPTQDELRQQKEEDMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASLAEQHLTPHQRGTQRVLFIPCQWRKGLKLSGETAVEKITLDGVRGLRVTLSATVHDVLYYMSPIYCQDIIDSVSNQLNRLYLKFLKRNPGYDGKVSLYGHSLGSVLSYDILCHQVNLSSPFPMNWMYKEHDENGESLPDKESHHVRNSPINQDYTFSMVSPCEENKSTQQTTSEMEAEYSEEPSVLGPALSSLEGFTAEPNSLELSNKGDVSELRSDSSDTCFEKMGVLDKPESVDVGLTVDKDESEVTSNKDEVIKKLREEIDSLKANLAELESHHSNNHTEEVLHSVPKISKKVPPIKDAAKSYTPYIKYTKLQFKVDTFFAVGSPLGVFLALRNIRIGIGRGQEYWEQENISEEMPACRQMFNIFHPFDPVAYRVEPLVCKEYVSQRPVLIPYHRGGKRLHIGFQEFTEDLAVRTHAIKNYMKSARDKVITICQSRKMENMEGESSEEEEEPSYGSFMMERLTGSKSGRIDHTLQDKTFEHPYLQAIGAHTNYWRDYDTALFILNHLYRDIPEDRDSSIVSNEDNSKYESTSAGWHEPRNTAEEDLPLTFSDNVVVRSFSSKAKKILQKRTESNF 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00025 784 Pfam DDHD domain 667 717 IPR004177 GO:0046872
Cca04g00025 784 Pfam DDHD domain 521 646 IPR004177 GO:0046872
Cca04g00025 784 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 6 736 - -
Cca04g00025 784 MobiDBLite consensus disorder prediction 142 164 - -
Cca04g00025 784 SUPERFAMILY alpha/beta-Hydrolases 175 340 IPR029058 -
Cca04g00025 784 SMART DDHD_2a 521 718 IPR004177 GO:0046872
Cca04g00025 784 ProSiteProfiles DDHD domain profile. 521 718 IPR004177 GO:0046872
Cca04g00025 784 Coils Coil 455 482 - -
Cca04g00025 784 MobiDBLite consensus disorder prediction 725 749 - -
Cca04g00025 784 PANTHER BNAA08G07860D PROTEIN 6 736 - -
Cca04g00025 784 MobiDBLite consensus disorder prediction 732 746 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00025 6 778 Acyl Lipid Metabolism Gene Families AT1G31480 62.313 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00025 - - gmx:100777360 1368.6