Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00013 ATGGCGAAATCGGGGAATAAGAATATGGGATCAACGTCTGTGTCTGTGTCTGCGTCGGCCAAAGTTCACCCTTCCAATGATCCTGAACTGGATCCCGACTCTTACGCCCTTGAGAAGTTCAGACTCTACGAAACCAGAGCGAGGTTTTACCTGATAGGGAGTGATCGAAACAAGAGGTTCTTCCGGGTGTTGAAAATCGATCGATCAGAGCCGTCCGATCTGAATATCAGCCAAGACCCTGTGCTGTATTCGCCCCAGGAAATCAAGAGCTTGCTTCAGCGGATTGCTGAAGGTAACAGGGCCACTGGTGGCCTCACTTTCGTCGCTAAAGTTTTCGGAATTGCCGGTTGCATCAAGTTTCTCGAGTCCTACTATTTGATTCTCGTTACTAAGCGCAGACAAATTGGTTCTATCTGTGGCCACGCAATCTATAGCATCAAGGAGAGCCAATTGATAACCGTTCCACATGTTTCTATTCAATCTGATTTAGCTCACTCTAAGACTGAGCTCAGGTACAAAAAGCTTTTGTCTAGTGTCGATTTGACCAAGGATTTTTTCTTTAGTTACACTTACCCTATAATGCAAAGTTTGCAAAAGAATGTCTCGCCCTGTCAAGACGGAGGAGGGATGTCATATGATAATATATTTGTTTGGAATGCGTATTTGACGCAAACAATCAGATCAAGATGCAATAACACCATTTGGACCATAGCTTTAGTTCATGGTCATTTTAGGCAGATTCGTCTATCAATTTTTGGGAGGGACTTCAGTGTTTCCTTGATTTCTAGACGATCAAGACATTTTGCAGGAACACGGGAAGGATTGAAGGAGGAGGAGCTAAAAACCAGTTACTTGAAAAGGGGAGTGAATGATCGGGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAAGCTGGCTCTTGCAAGGGCAAAATGAGTTCAGTTGTGCAAATGCGTGGATCAATACCACTTTTCTGGTCACAAGAAGCATCAAGATTTAGCCCTAAGCCTGACATAATTTTGCAGAGGTATGATCCAACATACCAAGCAACAAAATTGCATTTTGAAGACCTTGCTAAGAGATATGGCAATCCAATTATTGTTCTTAATTTGATTAAGACAGTTGAGAAACGACCTCGAGAAATGATGCTTAGGCGTGAATTTGCAAGCGCTGTTGGGTATCTAAACCAAATTCTACCAGTCGAGAACCATCTTACATTTATTCAATGGGACTTTCACAAGTTTGCAAAGAGCAAGTCTGCCAATGTTTTGGCAGTTTTAGGAGCTGTAGCAAGTGAAGCGCTTGATTTAACTGGTTTTTACTACAGTGGTAAACCCAGTATCATAAAGAGGGCCAACAAGAGCAATCGAACGAGTACAGGGAGGGATACTTCACTAAGAGATCTGAGAGCTAGTTCTGGAGATCTGAGGATTGGGAACAGTAATGAAATGCTAAATTCTGTGGTTAATCGAGACAGAGAGACTGACATGAACCATCAGAATACAAAAGATAATTTTAGTAGTGATGCACCACATTTTCAAAGTGGAGTTCTCCGTACCAACTGCATTGACTGCTTGGACCGTACAAATGTTGCCCAGTATGCATATGGTCTTCAAGCTTTAGGGCGCCAGCTCCATGCAATGGGTTTGACTGACATGCCAAAAGTGGATCCTTATAGTAGTATTGCTGCAGCTCTAATGGACATGTATCAAAGTATGGGAGATGCTCTTGCCCAGCAGTATGGTGGTTCTGCAGCTCACAATACTGTATTTCCAGAGAGGCAGGGAAAGTGGAAAGCAACAACACAATCAAGAGAGTTTTTAAAATCCATAAAACGATACTATAGCAATGCTTACACAGATGGTGAAAAACAAGATGCAATAAACTTATTTTTAGGTTACTTCCAACCACAGGAAGGGAAACCTGCTCTCTGGGAGTTGGATTCAGATTATTATCTCCATGTTTCTGGGATTGGGGATGATCTAATTCCTGAGAGGTGTTCTGAACCAAATCTCAAGCCTTCTGGAAGAGGTGGAACAGTATTCACCCCTATACCAGCTTGCAGAGAAGACTTCTCACGCATAAAGTTGACATCATTTGACAAATTAATTGAAAAAACCTGTAGTACAATTAAAAATGTAAGACTATGCTGTGAACCTGATCAAAGACCAGGTGGGGGTTCTGGAAACAGTGGTGTAGCACCTGATGCAGCTGAGATACAGCTCAAAAGCCCAAATTGGCTTTTCGGCCAGAGAAAGTATGAAGAGGGTTCCTCTGCTTCAAAAGTTGCTTCTCGTGAAACTGATGTTGAAGGATCTCATGCTAATGGCTTTTGTGACTTGAATTGGCTATCCTCGGGCAATGATATGAATGAAGAGGACGTTTTCCAAAGGTACCTTACAATGACCTCAACAAACGAGGCCAACGGTTGGTATGGAGGTAGTCTCCTTGGTGATCAAGATGAAAGCAGTGAGATATATAAACATTACGCCGAGTTATGCCAGGGACCTGCCTTGGAACTTTTCCAAAATGACCCCGAGAGGGAGCAACACTACGCAGGTGCTTTAAGCACAAGTTCATATGAAATTGTTAATGATGCTACTGTTGCAGCCGAAATGGAAGCAGCTCTAAAGGAGTATGACCAAGTCGGTTCTGACCTCGGGATCATTCCCATGTCTTGTAAATTCTTTGCTGATGATCCCAGCTGGCTGACGAGATGGTTAACTGGGGAAGAAAAAGTACCTAGGTTATGA 2769 0.429 MAKSGNKNMGSTSVSVSASAKVHPSNDPELDPDSYALEKFRLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISQDPVLYSPQEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGSICGHAIYSIKESQLITVPHVSIQSDLAHSKTELRYKKLLSSVDLTKDFFFSYTYPIMQSLQKNVSPCQDGGGMSYDNIFVWNAYLTQTIRSRCNNTIWTIALVHGHFRQIRLSIFGRDFSVSLISRRSRHFAGTREGLKEEELKTSYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFASAVGYLNQILPVENHLTFIQWDFHKFAKSKSANVLAVLGAVASEALDLTGFYYSGKPSIIKRANKSNRTSTGRDTSLRDLRASSGDLRIGNSNEMLNSVVNRDRETDMNHQNTKDNFSSDAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDMPKVDPYSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYLHVSGIGDDLIPERCSEPNLKPSGRGGTVFTPIPACREDFSRIKLTSFDKLIEKTCSTIKNVRLCCEPDQRPGGGSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGSSASKVASRETDVEGSHANGFCDLNWLSSGNDMNEEDVFQRYLTMTSTNEANGWYGGSLLGDQDESSEIYKHYAELCQGPALELFQNDPEREQHYAGALSTSSYEIVNDATVAAEMEAALKEYDQVGSDLGIIPMSCKFFADDPSWLTRWLTGEEKVPRL 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00013 922 MobiDBLite consensus disorder prediction 1 30 - -
Cca04g00013 922 MobiDBLite consensus disorder prediction 1 22 - -
Cca04g00013 922 Pfam SacI homology domain 112 420 IPR002013 GO:0016791
Cca04g00013 922 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 36 856 IPR043573 GO:0043813|GO:0046856
Cca04g00013 922 ProSiteProfiles Sac phosphatase domain profile. 176 588 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00013 Cca-Chr4 155300 171065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00013 1 922 Acyl Lipid Metabolism Gene Families AT1G22620 74.218 0.0 1424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00013 K22913 - gmx:100804786 1708.73