Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00009 ATGATGGGAGGAAGTTCTATTGATGATGATTGGGATTTAACTTCCTCGTCTAATGAGGTTCGGACTGTGGTCTTAGTTGGACGTACTGGCAATGGTAAGAGTGCTACAGGCAATACTATTCTTGGAAGGAAGGTCTTCAAGTCAAAGGCTAGCTCCCATGCTGTAACCACTTCATGTGAAATGCAGACAACAGAACTATATGAGGGACAAATTATTAATGTTATTGACACCCCAGGATTATTTGATTTTTCTGCTGGATCTGAGTTTGTTGGAAAGGAAATTGTCAAATGCATTGATTTGGCCAAGGATGGGATCCATGCTGTCCTTGTTGTGTTGTCTGTTAGAACACGCTTTACTGAGGAGGAAGAAAGTGCTCTACGGAGTTTGCAGAAATTATTTGGAAGCAAAATTGTTGATTACATGATTGTGGTCTTCACTGGAGGAGACGAATTGGAGGACAATGACGAGACACTTGAGGATTATTTAGGCCGTGGATGTCCAAAGCCTTTAAAGGAAATTCTTTTTCTGTGTGAGAATCGTTATGTACTTTTTGATAACAAGACTAAGGATGAAAGGAAGCGTGTTGGACAAGTTCAAGAACTTCTCTCTTTTGTAAACATGGTTCTATCACGGAATGTTGGACGACCTTATACAGATGAGTTATTTACAGAACTGAAGAAGGGAGCAATGGAGCTGCATAACCGACAAAGAGAGGTTGATTCTTTAAAATTAAAAGGACATTCAGAAGGAGAATTAATGGAGTTTAAAAAGCAAATGCAGCAAACATATGATGACCAATTGAAGCGAATTACTGAGATGGTTGAATCAAAGTTGAGGGAGGCAACTACGAGGCTTGAGCAACAATTGGCAGAAGAGCAAGCTGCAAGACTTAAGGCCGAGGAGAATGCAATGTTAGCTCAAATGAGATCAGATGATGAAATACGAAAACTCAGAGAACATCTTGAGAAGGCGCATGAAGAACTTCGCAAGCGTGGTGAGGTTCGTTGTGCCATTCTTTGA 1020 0.4059 MMGGSSIDDDWDLTSSSNEVRTVVLVGRTGNGKSATGNTILGRKVFKSKASSHAVTTSCEMQTTELYEGQIINVIDTPGLFDFSAGSEFVGKEIVKCIDLAKDGIHAVLVVLSVRTRFTEEEESALRSLQKLFGSKIVDYMIVVFTGGDELEDNDETLEDYLGRGCPKPLKEILFLCENRYVLFDNKTKDERKRVGQVQELLSFVNMVLSRNVGRPYTDELFTELKKGAMELHNRQREVDSLKLKGHSEGELMEFKKQMQQTYDDQLKRITEMVESKLREATTRLEQQLAEEQAARLKAEENAMLAQMRSDDEIRKLREHLEKAHEELRKRGEVRCAIL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00009 339 Gene3D - 21 236 IPR027417 -
Cca04g00009 339 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 2 329 IPR045058 -
Cca04g00009 339 Coils Coil 271 331 - -
Cca04g00009 339 Pfam AIG1 family 21 233 IPR006703 GO:0005525
Cca04g00009 339 ProSiteProfiles AIG1-type G domain profile. 18 226 IPR006703 GO:0005525
Cca04g00009 339 PANTHER BNAC06G07830D PROTEIN 2 329 - -
Cca04g00009 339 CDD AIG1 21 227 - -
Cca04g00009 339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 191 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00009 Cca-Chr4 100608 105547 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00009 - - gmx:100801425 572.778