Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02897 ATGATGGTAGGCTTTCTACTCTTTCTACTAAGTAGTCTTGGTCTAGTAATTAATGCATCAACCCTTAGTGTTTGTTCGAATTGTGGAGATTCCGTAGTCCCATATCCACTCAGCACTAACGAAAATTGTGGAGATAAAAGGTACAAAGTCTATTGCAATGATAGAAACTTAGAGTTCTTGTCAGCAACAGGGACTTACTATAAGATCCTTAGAATTGATCCAAGTGTTAACAAGCTTGTCATTAGCCCACCCATTATATTGAAAAATACTTGTTATTCTTCTGATCTATTCAAGGGAGGCTTATTGCTTGATGAAAGCTTGCCCTTCAATATATCTACTCAAAACACTGTCATGTTGCTTAATTGCTCTGATAATATCCTTCAGTCTCCTTTGAATTGTTCTTCAAATAGTATTTGCAGGAAGTTTGAGGAAAAGGTGGAGGAAGGAAATGGGTGTATGAACACCCTTTGTTGCCATTACTTAAAAGATTCAGCCATGAATTCCCATAAGATCAGAGTCAGGTTTGGAAGTTGCACTGCTTACACTTGTTTGGTGGGTTTCAAGCCTGATGACCCTCTTGAAACATGGAACTATGGGATTGAGTTACAATGGTTACCTCCCAATTGA 627 0.3812 MMVGFLLFLLSSLGLVINASTLSVCSNCGDSVVPYPLSTNENCGDKRYKVYCNDRNLEFLSATGTYYKILRIDPSVNKLVISPPIILKNTCYSSDLFKGGLLLDESLPFNISTQNTVMLLNCSDNILQSPLNCSSNSICRKFEEKVEEGNGCMNTLCCHYLKDSAMNSHKIRVRFGSCTAYTCLVGFKPDDPLETWNYGIELQWLPPN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02897 208 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 12 208 - -
Cca03g02897 208 Pfam Wall-associated receptor kinase galacturonan-binding 25 80 IPR025287 GO:0030247
Cca03g02897 208 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 12 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02897 Cca-Chr3 50298463 50299352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02897 25 208 Receptor kinase-like Gene Family AT5G02070 38.743 1.84e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02897 - - cam:101515529 341.658