Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02877 ATGCAGGGCTCTGAAACACTAAATAATTTTGCACAACCTTCATCTTCTATACTTGCTGGAGGGTTGCAGGGTTCTCGGCGAGAAATACTGAGATTTGGAAGTCTGGGCATTGCTATCTCTTGCCTTTTCTTCACCCTAAGCAACTGGAAGGCAATGCAATATGCTTCCCCTAAAGCAGTTTTGAATCTGTTGTTTGGTGTTACCCAGCCACCCTTGGAGAAGAAAGAAGATAACTCAAGAGATGATAGGATCCAGCAATTTGTGAACTACATATCTGAACTGGAAAGCAGGGGAAATGCTCAGATTGTTCCAGAATTTCCATCTAAACTTGATTGGCTGAATACAGCTCCACTTCAGTTTCACAGGGATCTGAAAGGGAAAATTGTACTGCTAGATTTCTGGACTTATTGTTGTATAAACTGTATGCACGTGTTGCCAGACCTAGATGTTTTGGAGAAAAAATACAAAGATATGCCGTTCATTGTTGTGGGTGTTCATTCTGCAAAGTTTGATAATGAGAAAGATTCTGAAGCCATTCGCAATGCAGTACTACGCTATGGAATTTCTCACCCGGTTGTCAATGATGGAGACATGTATCTTTGGCGGGAGTTGGGTATAAATTCATGGCCAACATTTGCTATTGTTGGCCCCAATGGTAAGCTTCTTGCACAACTTGCAGGAGAAGGTCACAAGAAGGATCTAGATGATTTTGTGGAGGCTGCACTTCTGTTTTATGGAAAACAGAACATGTTAGACAATACGCCGATTTCATTGAGTTTGGAAAAAGATAATGATCCACGCCTATCAACATCTCCACTCAAGTTTCCTGGAAAACTAGCAATTGATGTCCTTAATAACAGACTTTTTATTTCTGACAGCAACCATAACCGCATAGTGGTTACTGACTTTGATGGGAATTTTATTGTACAAATTGGGAGCAGTGGGGAGGAAGGTTTGCAGGATGGTTCCTTTGATGATGCTACTTTTAACCGACCTCAGGGCCTTGCTTATAATGCAAAGAAAAATATCCTTTATGTTGCAGACACCGAAAACCATGCCTTGAGGGAAATTGATTTTGTTAATGAGAAAGTGTGGACTCTTGCTGGAAATGGGACCAAGGGCTCTGATTATGTTGGAGGTGGAAAAGGAGATACTCAGCTCCTCAATTCCCCTTGGGATGTCTGCTTTCATCCATTTGAAGAAAAAATTTATATTGCCATGGCTGGCCAACATCAGATTTGGGAGCACAATTTATTGGATGCAACTACAAAATCATTCAGTGGTGATGGATATGAGAGAAATTTAAATGGATCAAGTTCTACAAGCACATCATTTGCACAACCTTCTGGTCTTTCACTGTCTCAAGATCTAAGGGAGATCTACATCGCTGATAGTGAGAGTAGTTCAGTTCGAGCTATTGATCTGAAAACAGGAGGATCTCGGTTGTTAGCTGGTGGTGACCCACTCTTCCCTGACAATTTGTTTAAGTTTGGTGATCAGGATGGAATAGGCTCTGAGGTACTTCTTCAACATCCATTGGGGGTTATGTGTGGAAATGATGGTGAAATTTATATTGCAGATAGCTACAATCACAAGATCAAGAAGCTGGATCCAACTAGTAAAAGAGTTAGCACCATTGCAGGGACTGGGAAAGCTGGTTTCAAAGATGGAACAGCTGTAAAAGCTCAGCTCTCTGAACCATCAGGAATTGTAGAAGGCAACCAGGGGAGATTATTTATAGCCGACACAAACAACAGCTTAATTCGATATCTTGATTTATACACTGGTGAATCTGAACTCCGTACGTTGGAGCTTAAAGGAATTCAACCTCCTAAACCAAAATCAAGATCTTTTAAACGTCTTAGACGACGAACATCAGCCGACACAATGCCAATTAGCATAGATGCTATTTCATCGAATGAGGGGAACTTGTTTATTAAAATATTATTACCAAATGAGTATCACTTTTCAAAGGAAGCACGCAGTAGATTCAGTGTTGATATTGAACCTGAAGATGCTGTGAATATTGACCCCCTTGATGGATCCCTTAGTCCAGAAGGATCTGCAACTCTTCACTTTAAGAGATCTTCTAACTCTGCTTCAATGGGAAGAATTAATTGCAAGGTTTACTATTGCAAGGAAGATGAAGTTTGTTTGTACCAGTCTTTGCTGTTTGAGGTCCCCTTCCGAGAGGGAGTTTCTAACCCTGCCAAAGCTGATGTCACTCTTGCACATATTGTGAAACCCAAAACTTCAACCAGCAACATACTGCAGCCAGTTGCCCCGTGA 2289 0.4111 MQGSETLNNFAQPSSSILAGGLQGSRREILRFGSLGIAISCLFFTLSNWKAMQYASPKAVLNLLFGVTQPPLEKKEDNSRDDRIQQFVNYISELESRGNAQIVPEFPSKLDWLNTAPLQFHRDLKGKIVLLDFWTYCCINCMHVLPDLDVLEKKYKDMPFIVVGVHSAKFDNEKDSEAIRNAVLRYGISHPVVNDGDMYLWRELGINSWPTFAIVGPNGKLLAQLAGEGHKKDLDDFVEAALLFYGKQNMLDNTPISLSLEKDNDPRLSTSPLKFPGKLAIDVLNNRLFISDSNHNRIVVTDFDGNFIVQIGSSGEEGLQDGSFDDATFNRPQGLAYNAKKNILYVADTENHALREIDFVNEKVWTLAGNGTKGSDYVGGGKGDTQLLNSPWDVCFHPFEEKIYIAMAGQHQIWEHNLLDATTKSFSGDGYERNLNGSSSTSTSFAQPSGLSLSQDLREIYIADSESSSVRAIDLKTGGSRLLAGGDPLFPDNLFKFGDQDGIGSEVLLQHPLGVMCGNDGEIYIADSYNHKIKKLDPTSKRVSTIAGTGKAGFKDGTAVKAQLSEPSGIVEGNQGRLFIADTNNSLIRYLDLYTGESELRTLELKGIQPPKPKSRSFKRLRRRTSADTMPISIDAISSNEGNLFIKILLPNEYHFSKEARSRFSVDIEPEDAVNIDPLDGSLSPEGSATLHFKRSSNSASMGRINCKVYYCKEDEVCLYQSLLFEVPFREGVSNPAKADVTLAHIVKPKTSTSNILQPVAP 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02877 762 CDD NHL-2_like 311 652 IPR045302 -
Cca03g02877 762 ProSiteProfiles NHL repeat profile. 509 539 IPR001258 GO:0005515
Cca03g02877 762 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 79 758 - -
Cca03g02877 762 Pfam Thioredoxin-like 126 220 IPR012336 -
Cca03g02877 762 SUPERFAMILY NHL repeat 270 597 - -
Cca03g02877 762 Pfam NHL repeat 329 354 IPR001258 GO:0005515
Cca03g02877 762 Gene3D - 496 592 IPR011042 -
Cca03g02877 762 Gene3D - 246 415 IPR011042 -
Cca03g02877 762 SUPERFAMILY Thioredoxin-like 101 239 IPR036249 -
Cca03g02877 762 Gene3D Glutaredoxin 73 244 - -
Cca03g02877 762 ProSiteProfiles Thioredoxin domain profile. 63 243 IPR013766 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02877 - - gmx:100795843 1446.03