Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02868 ATGGCAAGGGTGGTTGCACTCCAACAGAACCAACTTTCTTTCTCTCCCTTAGCTTCCTCTCTTTCTGACTTCAGCGGAACCAGACTTCAAACTCAACTTCAGCTCAAGAGAAAATTATTGCAGCCAAAAGGGTGTTTTCATGTCTATACATCAAGCACTAGCACTCTTGTCAAAGAGGGTCACCAGGTGGTTTTATTTACAAGAGGAAAAACACCTGTCATTCAACAATTGTCAGGTGAATCGGCCAGTGATTATGCTGATTTTTCTTCTAAGGCTAAAGCTTTTGCAGTTCCTAGGAGGAAAGCAATGTCCTTGATCTTATCAAGTTATATTTTCTCGGAGGTTGGTCAAGCATTGGCTCAACAGTCTTCTGTGTTCCGTGAATATATAGATGCATTTGATGGTTATTCATTCAAGTACCCAGGGAATTGGATTCAAGTTCGAGGTGCTGGAGCTGACATATTTTTTAGGGACCCTTTTGTTCTTGATGAAAATCTATCTGTTGAAATTTCTTCTCCTTCATCTTCCCAATACAAGAGTGTCAAAGATTTGGGTCCACCCCAACAAGCTGGAAAGACTGTGCTCAAACAATATTTGACTGAGTTTATGTCTACTAGACTTGGCGTTAGACGTGAATCAAATATTCTTTCCACGTCTTCAAAAGTAGCTAATGATGGCAAGTTATACTATCAAGTTGAGGTAAATATTAAGTCATATGCCAATAACAATGAGCTTGCTGTTATGCCACAAGATCGGGTGGTACGTCTGGAATGGGATCGTAGATACCTATCTGTTCTTGGGGTTGAAAACAACCAACTGTATGAGTTGAGATTGCAGGTGCCAGAAAATGTTTTTTCAGAGGAGGAAAATGATCTTCGTAAAGTCATGGATTCGTTTCGAGTGAACAAGATTGTCGCTTAA 921 0.4017 MARVVALQQNQLSFSPLASSLSDFSGTRLQTQLQLKRKLLQPKGCFHVYTSSTSTLVKEGHQVVLFTRGKTPVIQQLSGESASDYADFSSKAKAFAVPRRKAMSLILSSYIFSEVGQALAQQSSVFREYIDAFDGYSFKYPGNWIQVRGAGADIFFRDPFVLDENLSVEISSPSSSQYKSVKDLGPPQQAGKTVLKQYLTEFMSTRLGVRRESNILSTSSKVANDGKLYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNQLYELRLQVPENVFSEEENDLRKVMDSFRVNKIVA 306
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02868 306 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC 70 305 - -
Cca03g02868 306 Pfam PsbP 126 301 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Cca03g02868 306 PANTHER - 70 305 - -
Cca03g02868 306 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 120 301 - -
Cca03g02868 306 SUPERFAMILY Mog1p/PsbP-like 127 301 IPR016123 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca03g02868 Cca-Chr3 49969463 49973688 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02868 - - vun:114184030 477.633