Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02865 ATGGCAAGGGTGGTTGCACTCCAACAGAACCAACTTTCTTTCTCTCCCTTAGCTTCCTCTCTTTCTGACTTCAGCGGAACCAGACTTCAAACTCAACTTCAGTTCAAGAGAAAATTATGGCAGCCAAAAGGGTCTTTCCATGTCTCTGCATCAAGCACCAAGAAAATCCTCATCATGGGAGGCACCAGGTTTATTGGTGTCTTTTTATCTAGGCTCCTTGTCAAAGAGGGTCACCAGGTGACTTTATTTACAAGAGGTAAAGCGCCTGTCACTCAGCAATTGCCAGGTGAATCAGACAGTGATTATGCTGATTTTTCTTCCAAGATCCTGCATTTGAAAGGAGACAGGAAGGACTTTGACTTTGTAAAATCCAGTCTCTCGGCACAGGGGTTTGATGTTGTTTATGACATAAATGGACGAGAGGCAGATGAAGTGGAGCCCATACTTGATGCACTGCCTAATCTGGAACAGTTTATTTACTGCTCTTCTGCTGGTGTCTATCTCAAATCTGATCTATTACCTCACGCGGAGACTGATGCAGTTGATCCTAAGAGCAGACACAAGGGAAAGCTTGAGACAGAGAGTTTGCTACAGTCAAAGGGTGTTAATTGGACTTCTATAAGGCCAGTTTACATCTATGGACCCTTGAACTACAACCCCGTCGAAGAATGGTTCTTCCATAGATTGAAAGCTGGACGCCCAATTCCTATTCCCAGCTCAGGATTACAGATAACCCAACTTGGTCATGTTAAGGATTTGGCTAGAGCTTTTATTCAAGTTCTTGGTAATGATAAGGCCAGCAAACAAGTATTCAACATCTCAGGAGAGAAGTATGTCACGTTTGATGGGTTAGCAAGAGCATGTGCTAAGGCTGGTGGGTTCCCAGAGCCAGAGCTCATTCACTACAACCCTAAAGATTTTGATTTTGGGAAAAAGAAATCATTCCCATTCCGTGACCAGCATTTTTTTGCATCAGTTGAGAAAGCAAAGAGCGTGCTTGGGTTTGTTCCTGAATTTGACCTTGTAGAAGGTCTTGCAGACTCGTATAACCTTGACTTTGGTAGAGGAACATACCGTAAAGAGGCTGATTTCTCAACAGATGACATAATTCTTGGCAAAAGTCTTGTTGGTGTATAA 1137 0.4318 MARVVALQQNQLSFSPLASSLSDFSGTRLQTQLQFKRKLWQPKGSFHVSASSTKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDSDYADFSSKILHLKGDRKDFDFVKSSLSAQGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGLQITQLGHVKDLARAFIQVLGNDKASKQVFNISGEKYVTFDGLARACAKAGGFPEPELIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVLGFVPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDIILGKSLVGV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02865 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 50 371 - -
Cca03g02865 378 Gene3D - 51 351 - -
Cca03g02865 378 Pfam NAD dependent epimerase/dehydratase family 56 273 IPR001509 -
Cca03g02865 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 54 350 IPR036291 -
Cca03g02865 378 CDD SDR_a1 54 307 - -
Cca03g02865 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 50 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02865 Cca-Chr3 49960105 49963721 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02865 - - gmx:100799721 724.546