Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02861 ATGGGTTGTGTTTGTGTGCAATTGCAGCTCCTACtctttcttcctttctttctttctGCATCGGCTGGATGCGATAAGCCTCCGGTGCTATTCGTCTTCGGCGATTCCAACTCCGACACCGGTGGAGCCGCAGCCGGACTCGGTTACCCAATCCATCTTCCAAATGGCCGCACTTTCTTTAATACATCCTCCGCTCGCATCTCCGACGGACGCCTCCTCATCGATCTACTCTGCCAAACTTTGAATGCAAGTTTGTTGCTACCCTACTTGGACTCCTTGTCTGGAACCTCATTCACAAATGGAGCAAACTTTGCAGTGGCGGGGTCCTCTACCCTCCCAAAAAATGTTCCTTTCTCCCTTAATATACAACTCATGCAGTTCCTCCGTTTCAAAGCTCGTACTCTTCAACTTGTTACCCAGGGTGCCAGAAATTTGATCAATGATGAAGGCTTCCGGGATGCACTCTACTTGATTGATATTGGACAAAACGACCTTGATGATGCATTTTCCAAAAATCTATCGTATGCGCAAGTCATCGGGAGGATCCCAGCATTTATAATTGAAATTGAGAATGCTATTAAGATGCAGAGGAGTTCAATAAAAACACTATCAAGTGACCCTTTGATTTACGCTTGA 636 0.4481 MGCVCVQLQLLLFLPFFLSASAGCDKPPVLFVFGDSNSDTGGAAAGLGYPIHLPNGRTFFNTSSARISDGRLLIDLLCQTLNASLLLPYLDSLSGTSFTNGANFAVAGSSTLPKNVPFSLNIQLMQFLRFKARTLQLVTQGARNLINDEGFRDALYLIDIGQNDLDDAFSKNLSYAQVIGRIPAFIIEIENAIKMQRSSIKTLSSDPLIYA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02861 211 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 10 196 - -
Cca03g02861 211 Pfam GDSL-like Lipase/Acylhydrolase 30 195 IPR001087 GO:0016788
Cca03g02861 211 Gene3D SGNH hydrolase 25 206 IPR036514 -
Cca03g02861 211 PANTHER OS01G0329900 PROTEIN 10 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02861 Cca-Chr3 49922631 49928541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02861 28 177 Acyl Lipid Metabolism Gene Families AT4G10950 29.518 5.46e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02861 - - ccaj:109796446 391.734