Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02853 ATGATTTCTGCAGGAGGTAGGGATGCAATAAAGGGACTAGGGTTAGGGTTAGGGCTAGGGTTGGGTGCTGGAAGGAGAGAGATGGTGGAGTCTGAGCTTGAAGAAGGTGAGGCATGCTCGTTCCAGAACCATGAAGATTATGATGCCACAGTTGATCCCGATGTTGACCTCTCTTACATTGATGAAAAAATTCAAGATGTTCTGGGACACTTTCAGAAGGATTTTGAGGGCGGGGTGTCTGCAGAGAATCTGGGGTCAAAATTTGGTGGTTATGGGTCATTTTTGCCCACCCATCAGCGCTCTCCTGTTTGGTCTCGTCCAAGGACTCCACAAAAAAATCAAGGTCAAAATACGCCCAGGTCTCCCAATAATCTGCAACTGGAGGGTGGGCAGGGGGATGCTGTACAATGTTCAGCTGGAACTCAGTCATTGAGACCTGTTCCAGGTTCTGCTAACTCTTCTAGGATGGCTGCAAACAAGGGTCACTCTTCAGATGATGGAATCAGTCAAGAAAAATACATGACAACCACTAATGCTAATACATCCACTTCTAAGCAGGAGTCTCTCAACAAAAAAGTTACTAGCACATCAGACCAGAAGACACTGAAGGTTCGAATCAAAATGGGTCCTGATAATTTATCAACGCGGAAAAATGCTGCAATATACAGTGAAATTGGTCTTGATGTGTCACCATCATCATCACTAGATGACAGCCCCTCAGAAAGTGAAGGGATTTCTCGTGGTCCTCAAGATGCTCCTTTTGAATCTCCAACGATTATCCTTCAGATTATGACAAATATCCCTCTGCTATTGTCGCCTCTTCCTGATGATATCCTTGAATTAACATTAAAGGAAACACGTGCCAGAGATAGTATCCCTGGTCTTGTTCATTTGGATGACCCAGAAAGTTTGGACATGCCACTAATTGAATCTAATAATGAAAAGGGTGACAGAAAATCGTTAGGTGGGAGGAAAATGAAATCTCTGGAGGGTTGTGAATCCTTAATGGAAGTCAAGGGTTCTACAAAGAAGAATGCTCGAAGTGATGTTGGAGTGCTGTCAAGAAAGGAACAAAATACAGATGCTTTGACTATGGAGGAGCTAGTTTCAAAAACCATGAAACTTCCACTTTTATCCAGTTCTTATCCTTTCGGTGATGACTTGGTTAAGGCTGTGGATGGGTCATGCGATTCATTGAAGGAAGTCAACAAAGTTATGGCGAGGGAGAAAACCTTCTCTGATCAGGGACCAAAGGAACGGGCAGAGACAACATCTACTGAGGTGAATGGTTTTGCTGAGAAGGCAAAGGGAAGTTCAGCAAGAAAAGTTGTGGGAGATAAGGTTTCTCATGATGAGTATACAGTGAAAGACAATCCTCATGGAGATAAAAATTGCCACTCAATGATAGCTGAATCTAATGTTTCCAAAGTTCGGCCAGCATCTAACTCTGAAGAGCCTCCTAAGAAGGCTAGTCTGAGAGGTAGCCTCTGTGAACAAGACAGTATGACATTAACTGTTGTGACAGAACATCAAATTCCAGGGGGTAAGAAGAAGCCAAAGGGAAGTCATGGCACCATTGTTATGGAGAGGGAAAAAGAAAATTTGAAGGTTGGGCCCTCTTCAGTTCCTAAAACAAAAAAGAGTTCTGATGATAGTTCTACTTCAAAAAATGAAACTGAAGATGTCAGAGTACCAAAAAATCTTGGAAAGACTAGAGATACATACAAAGATTTCTTTGGGGAATTGGAAGATGAGGAGGACAGAATGGATTCACTGGAGACCCCTTGTGAGGAAAAAGTGAAGGAATCTGAGGTGGTCGAGAGGAGTGCACCTACAACTAATTGTGGAGCAAAGGAGAGATCCAGTGGTAAGAAAGTTGATAAGCCATCAACAGCTGAAATATACCCTAAAACAGTCACAAATGTCTGGTCCACTGAAAATGAAAATGGTACTAATGTAGAGAATGGTAAAGGGATTCCTGCAATGATACCAACTGTTGAGATTGAAGATAATTGGGTACAGTGTGACAAGTGTCATAAATGGCGTCTTCTTCCTCTTGGAACAAATCCTGACAACCTACCTGAAAAGTGGCTGTGTAGCATGCTTAATTGGTTGCCTGACATGAATCGATGTAGCTTTAGTGAGGATGAAACCACTAAAGCACTTGTTGCATTTTACCAAGGGCCTCCTCTTGATGGTCAAAGCAACCTGCAAAATGTCTCTGGTAGTGTTATGGTCGGAGGAACCATGGCAACATCCAATCATCCTGACCAACCCCAGCAAAATAATGATCTGCATGCAGTACCTGGGGGGAAGAAAAAGCTTGTGAAAGAGATACCAAATTCTATTAATAAAGACAGCTTTCCTCAATCTTCATATCCTATTAAGAAAAACTTGCCGTCAGCAGTGAAAAGCAGGAGCTTAAATGATGTGAACAAATCTCCTGCTGTGAGTGAAGCTGATTTTCCAGCAGAGAAACACAAAAATAAGCAGAGGATGATGGAGTACAATTCTGATAGAGGTGATATGAAGAGTATGAAGGTCAAAAGCAGGAGGGACCCCGATCAAGATTTTTCTAGGCCATCCAAGAAATCTAAGGCTGACAGGGTTCATTCTTCCAATGAAGAATGGATTGTTGAACAGAATGGGACTACTAGGAAGGTGGGTGGCCAAAGCTCAAATAGCACTTTTGCAACTACTTCAGTTGGCAAAGATCGACCTAGACAGAAAGAACGCTCCTCTTCGAGGGACTCCAAATCAGGAAAAGAGAGGATGCCAGAGTCTGCTGAAAACACAAACAATAAAGGTCAGTGTTCGTTGGATGAGGGGTCCCTTGATCTGGGAAATTGTGATTCAATTGGTAGTGTGAAAAAGAGGAAATTGAAGGGGTATCAAAATGCTCAAACATACAGCCCAGGTAATCCACGCCTACAGGATAGGAAAACTTCTGAGCATGAGTTCAGTAATTCCAGGAAGGAAAAGAAGGCAAAAATTTCAAAATCTGAAGGCAAAGAATCAAGTGCCAGTAAAGGCAGTGGCAGGACTGACAAAAAAGTTAGTCATACAAAGAACCAGAAGTTCAGGCAAAACCCTGAGAGCGGCATGTCACAGCGGAGCTTGGATGGCATGGAATGTTCAAAAAGGGACTTGGGGTCTGTACAGGCTTCTGTTGCTGCCACTTCAAGTTCTTCTAAGGTTTCTGGCTCTCATAAAACCAAAGCTAGCTTCCAGGAAGTGAAAGGCTCACCTGTGGAATCAGTTTCCTCATCACCTATAAGAATTTCAAATACAGATAAGTTTACGAACAAGGAAATTATTGGGAAAGATGACTCTCATGATATTGCTGTTGCCGACAGTCCAAGAAGATGCTCAGATCGTGAGGATGATGGTGGGAGTGATCGGTCTGGAACTGCTAGGAAAGATAAATCCTTCATCATTGCCCACAGGTCAGGTTTTCAGGACAAGGGTGTTAATCACATGTCAGATACTAAACTTAAAGCTCAAACAACTAGCTATTGTACCAATTTTGGTGTGGACACTAGAGTCCCAGATGGGATATATCCAGGCACAGAGCAGACTGAGCCTCCAGGTGAAGACAGAGTCGATGTTTGTTATTCTAATATATCTCATGCAAGGAAAAATGGCATAGAATCAGGTTTGGAGGACAACAATGACAGCTTTAAGGCAGAGTCTCATGCAGATAAGGTCAAGAATACTAGCTCTCCGAGTCAACTGAAAGATCAGTCTCCCCTACATGAGGCAAAACATAAGGATGGAAAAATTAAGTTGCAGGAGAAGTCTGGGCTCAAGCCTGACCAGAGTGAGAATATACATGCTGGCAAGAAAGATTTTACAGGAAAAAATGAGAGTAGGAAAAAGGAGAATCTCTTAAATCGGGGTCATGACTTTCAAGATGTTAGTACAGATGCCCTATACAAACAGGAGTTATTTCATGCTCCTGTTCAGAATCAGTTGCCGGATTGCGATACTGAAAGAACCACAAAGAGGTCTCTTTTGGAAAGAACTGATCAAGAAGTACATGGAAAAGGGAAGCCATTGTCATCATTGCCATCTGAAGGATCTCAAGTTGAGACATTGGGTCGTTGCCCACGACCAGTTGGTTTACATAAAGGAAATGGAGATAATGAGGTTGATCCTTCCAAAGTTGATGATGTGTCAAGGCTCCAAAAAAAACAATTGAAAAAGACTGACCATCAAAATGGTAATCAGCAAATTGGTTCAAGAAATCCCATACTTAATGGTCATAAGTCCAAGGAGCTTGATGCCCCTAGTCCAGTTAGAAGGGATTCTTACAGCCATGCTGCTAACAATGCTGTGAAAGAAGCTAAAGATCTTAAGCATCTGGCTGATCGACTTAAGAATTCTGGATCCACTGTTGAGAGCACTAGTCTTTACTTCCAGGCAGCCCTCAAATTTCTTCATGGGGCCTCTCTGTTAGAATCTGGCAACAATGATAATGCTAAACACAATGAGATGATTCAATCAAAGCAAATGTATAGTAGCACTGCAAAATTGTGCGAGTTTTGTGCCCACGAATATGAGAAATCAAAAGACATGGCGTCAGCTGCTCTTGCCTACAAATGCATGGAGGTAGCATATATGAGGGTAGTATATTCTTCACACGGTAGTGCAAACAGAGATCGGCATGAGTTGCAGACAGCACTCCAAATGATTCCGCTTGGTGAATCTCCATCGTCATCTGCCTCTGACGTTGACAATGTTAACAACTCTACAGCAGCTGACAAGGTCACCATATCTAAGAGTGTCAATTCGCCACAAGTAGCTGGAAGCCATGTTATTGCTGCACGAAATCGTCCCAATTTTGTGCGATTGCTCAATTTTGCTCAGGATGTTTGTTTTGCCATGGATGCCTCGAGGAGATCACGGATTGCTTTTGCAGCTGCCAATTCAAGCCCAGGCGTGGGCAAGAATGCAGATGGTATCTCCTCTATCAAGAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGGGTTACTACATTTGGTACGGGTTGCCGTGGAGGCCATTAATCGTTGA 5058 0.428 MISAGGRDAIKGLGLGLGLGLGAGRREMVESELEEGEACSFQNHEDYDATVDPDVDLSYIDEKIQDVLGHFQKDFEGGVSAENLGSKFGGYGSFLPTHQRSPVWSRPRTPQKNQGQNTPRSPNNLQLEGGQGDAVQCSAGTQSLRPVPGSANSSRMAANKGHSSDDGISQEKYMTTTNANTSTSKQESLNKKVTSTSDQKTLKVRIKMGPDNLSTRKNAAIYSEIGLDVSPSSSLDDSPSESEGISRGPQDAPFESPTIILQIMTNIPLLLSPLPDDILELTLKETRARDSIPGLVHLDDPESLDMPLIESNNEKGDRKSLGGRKMKSLEGCESLMEVKGSTKKNARSDVGVLSRKEQNTDALTMEELVSKTMKLPLLSSSYPFGDDLVKAVDGSCDSLKEVNKVMAREKTFSDQGPKERAETTSTEVNGFAEKAKGSSARKVVGDKVSHDEYTVKDNPHGDKNCHSMIAESNVSKVRPASNSEEPPKKASLRGSLCEQDSMTLTVVTEHQIPGGKKKPKGSHGTIVMEREKENLKVGPSSVPKTKKSSDDSSTSKNETEDVRVPKNLGKTRDTYKDFFGELEDEEDRMDSLETPCEEKVKESEVVERSAPTTNCGAKERSSGKKVDKPSTAEIYPKTVTNVWSTENENGTNVENGKGIPAMIPTVEIEDNWVQCDKCHKWRLLPLGTNPDNLPEKWLCSMLNWLPDMNRCSFSEDETTKALVAFYQGPPLDGQSNLQNVSGSVMVGGTMATSNHPDQPQQNNDLHAVPGGKKKLVKEIPNSINKDSFPQSSYPIKKNLPSAVKSRSLNDVNKSPAVSEADFPAEKHKNKQRMMEYNSDRGDMKSMKVKSRRDPDQDFSRPSKKSKADRVHSSNEEWIVEQNGTTRKVGGQSSNSTFATTSVGKDRPRQKERSSSRDSKSGKERMPESAENTNNKGQCSLDEGSLDLGNCDSIGSVKKRKLKGYQNAQTYSPGNPRLQDRKTSEHEFSNSRKEKKAKISKSEGKESSASKGSGRTDKKVSHTKNQKFRQNPESGMSQRSLDGMECSKRDLGSVQASVAATSSSSKVSGSHKTKASFQEVKGSPVESVSSSPIRISNTDKFTNKEIIGKDDSHDIAVADSPRRCSDREDDGGSDRSGTARKDKSFIIAHRSGFQDKGVNHMSDTKLKAQTTSYCTNFGVDTRVPDGIYPGTEQTEPPGEDRVDVCYSNISHARKNGIESGLEDNNDSFKAESHADKVKNTSSPSQLKDQSPLHEAKHKDGKIKLQEKSGLKPDQSENIHAGKKDFTGKNESRKKENLLNRGHDFQDVSTDALYKQELFHAPVQNQLPDCDTERTTKRSLLERTDQEVHGKGKPLSSLPSEGSQVETLGRCPRPVGLHKGNGDNEVDPSKVDDVSRLQKKQLKKTDHQNGNQQIGSRNPILNGHKSKELDAPSPVRRDSYSHAANNAVKEAKDLKHLADRLKNSGSTVESTSLYFQAALKFLHGASLLESGNNDNAKHNEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCMEVAYMRVVYSSHGSANRDRHELQTALQMIPLGESPSSSASDVDNVNNSTAADKVTISKSVNSPQVAGSHVIAARNRPNFVRLLNFAQDVCFAMDASRRSRIAFAAANSSPGVGKNADGISSIKKALDFSFQDVEGLLHLVRVAVEAINR 1685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02853 1685 MobiDBLite consensus disorder prediction 228 253 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 1215 1301 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 803 1090 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 530 569 - -
Cca03g02853 1685 PANTHER CW-TYPE ZINC FINGER 28 1683 - -
Cca03g02853 1685 Pfam CW-type Zinc Finger 671 717 IPR011124 GO:0008270
Cca03g02853 1685 MobiDBLite consensus disorder prediction 876 903 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 1338 1436 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 1053 1090 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 439 464 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 303 324 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 904 929 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 978 1025 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 1381 1404 - -
Cca03g02853 1685 ProSiteProfiles Zinc finger CW-type profile. 666 719 IPR011124 GO:0008270
Cca03g02853 1685 MobiDBLite consensus disorder prediction 1111 1144 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 549 569 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 1026 1040 - -
Cca03g02853 1685 Gene3D - 662 721 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 228 245 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 1180 1201 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 1249 1300 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 1215 1235 - -
Cca03g02853 1685 PANTHER CW-TYPE ZINC FINGER 28 1683 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 962 977 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 820 875 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 98 198 - -
Cca03g02853 1685 Coils Coil 1442 1462 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 602 630 - -
Cca03g02853 1685 MobiDBLite consensus disorder prediction 434 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02853 Cca-Chr3 49846703 49859007 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02853 - - gmx:100806105 2679.82