Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02845 ATGAGGATCGTTGGACTCACGGGTGGAATAGCGTCAGGGAAGAGCACCGTGTCGAATCACTTCAAATCGCACGGCGTTCCCGTTGTCGACGCCGACATTGTTGCTCGCCAAGTCTTAACAAAAGGAAGTGCTGGATGGAAGAAAGTCGTCGCTGCTTTCGGAGATGAAATCCTCCTCGACAATGGAGAAGTCAACAGAATCAGGCTCGGCCAAATCGTCTTCTCTGACCCTGACAAGCGTCAATTTCTCAATCGGTTGCTTGCTCCTTACATATCGCGGGGAATGTTTTGGGAGGTTTTGAAGCTGTGGATGAAGGGTTATAAGGTCATTGTTCTTGACGTGCCTTTGTTGTTTGAGGCAAAGATGGATAGGTTCACGAAGCCTGTTATTGTGGTGTGGGTTGATCCCGAGACGCAGATTCGGCGGCTCTTGGTGAGAGACAGATCCAGTGAGGAGGATGCGCGAAATAGGGTTAATGCTCAGATGCCGTTGGATGTTAAGAAGGGTAAAGCTGATATAGTTATAGATAACACTGGTTCCTTGGATGACTTGACTCAACAGTTTCAGAAAGTTCTTGTTGAGGTCACTAGGCCATTGACATGGACTGAGTTTTGGCTTTCCAGGCAGGGAGTCTTCACTATTATCGCTTCTGTTACCTCTGGTGTTGTTTTGTTTGTGAAGGCATTTAGTAATCATGTCCACACTTCATAA 711 0.4712 MRIVGLTGGIASGKSTVSNHFKSHGVPVVDADIVARQVLTKGSAGWKKVVAAFGDEILLDNGEVNRIRLGQIVFSDPDKRQFLNRLLAPYISRGMFWEVLKLWMKGYKVIVLDVPLLFEAKMDRFTKPVIVVWVDPETQIRRLLVRDRSSEEDARNRVNAQMPLDVKKGKADIVIDNTGSLDDLTQQFQKVLVEVTRPLTWTEFWLSRQGVFTIIASVTSGVVLFVKAFSNHVHTS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02845 236 CDD DPCK 3 183 - -
Cca03g02845 236 Pfam Dephospho-CoA kinase 3 182 IPR001977 GO:0004140|GO:0005524|GO:0015937
Cca03g02845 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 191 IPR027417 -
Cca03g02845 236 Gene3D - 1 200 IPR027417 -
Cca03g02845 236 TIGRFAM TIGR00152: dephospho-CoA kinase 3 190 IPR001977 GO:0004140|GO:0005524|GO:0015937
Cca03g02845 236 Hamap Dephospho-CoA kinase [coaE]. 1 198 IPR001977 GO:0004140|GO:0005524|GO:0015937
Cca03g02845 236 PANTHER DEPHOSPHO-COA KINASE-RELATED 1 227 - -
Cca03g02845 236 PANTHER DEPHOSPHO-COA KINASE 1 227 - -
Cca03g02845 236 ProSiteProfiles Dephospho-CoA kinase (DPCK) domain profile. 3 206 IPR001977 GO:0004140|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02845 Cca-Chr3 49783326 49787556 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02845 K00859 - gmx:100791096 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02845 03 49783326 49787556 Cca03g02845 03 49783326 49787556 ECH