Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02844 ATGGCAGCTAAACCAACTGATGAAGCTCATCAAGGAGAAACCCTCAAGTACCAGACGTGGGTTTTGAAAGTATTGATCCACTGTGAAGGTTGTAAAAAGAGAGTCAGGAAAATTCTTCAGGGAATTGATGGGGTTTATAGAACAGAGGTTGATTCTCTGCAGCACAAGGTTACTGTCACTGGTAACGTGGACGCTGAGACTCTCATCAAGAGGCTTTCAAGATCAGGGAAACTAGTGGAGCTTTGGCCAGAAAAGCCTGTTGAAaataagaaagataatagtaataataagaaGTCTGGAAAGTCCAACAAGGGTGGTGATGTTAATAAGGAGAAGgaaaaccaaaagaatagtgaacaagttgctgatgatggtggtggttccaatgagggttgtaaagacgaTGCTGGTGAAGATTCTGACAAAGGGGGTCATAGTGATGAGTGTGAGGAGGGAGGTGGTGGTGGTGAAGGTGGCaaaaagaagaaaaagaagaagaagaagaagaacaaAGGGGAAAACGGTGGTTCTGGTACTGGTTCTAGTTCTGCTCCTAATAATAATGGAGGGGGAGAAGAAAGTAGTAAAGTTGATGCAATTGTCCCTTCAAATTTGGCATCTTCCGTGGCTCACAAGGATCTTATAAGCCCtccaattcaacatgcatacccatatccacatccacatATGTATTATTCGCCACCACCAGCATATGGATTAAGCTATAACACAGCATATCCTATATCAAGTGCTTCATATTATGTTGGTGCCCCCATCATGCCCATGCATGCTTACACTACTGCATACTCTAGAATGCCACCTCCTCCTCCACCGTCTGATCCGATCATGCACTATGGCGATGATGAGGAAGAGTACTACGAAGGTGGTGGATATTGCTCCATTATGTGA 909 0.3707 MAAKPTDEAHQGETLKYQTWVLKVLIHCEGCKKRVRKILQGIDGVYRTEVDSLQHKVTVTGNVDAETLIKRLSRSGKLVELWPEKPVENKKDNSNNKKSGKSNKGGDVNKEKENQKNSEQVADDGGGSNEGCKDDAGEDSDKGGHSDECEEGGGGGEGGKKKKKKKKKKNKGENGGSGTGSSSAPNNNGGGEESSKVDAIVPSNLASSVAHKDLISPPIQHAYPYPHPHMYYSPPPAYGLSYNTAYPISSASYYVGAPIMPMHAYTTAYSRMPPPPPPSDPIMHYGDDEEEYYEGGGYCSIM 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02844 302 Gene3D - 15 79 - -
Cca03g02844 302 ProSiteProfiles Heavy-metal-associated domain profile. 26 81 IPR006121 GO:0046872
Cca03g02844 302 MobiDBLite consensus disorder prediction 83 119 - -
Cca03g02844 302 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 1 302 - -
Cca03g02844 302 MobiDBLite consensus disorder prediction 128 158 - -
Cca03g02844 302 SUPERFAMILY HMA, heavy metal-associated domain 17 82 IPR036163 GO:0046872
Cca03g02844 302 MobiDBLite consensus disorder prediction 174 193 - -
Cca03g02844 302 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 302 - -
Cca03g02844 302 MobiDBLite consensus disorder prediction 83 196 - -
Cca03g02844 302 Pfam Heavy-metal-associated domain 26 77 IPR006121 GO:0046872
Cca03g02844 302 CDD HMA 26 77 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02844 Cca-Chr3 49774973 49776924 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02844 - - gmx:100791626 380.178