Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02839 ATGGAAATTGGAGGCAGAAAGTTGAAAAGCAGAGAAACGATGGCCGTCAAATCGGTGACGCAGTCGTCACCTCCTCCGAGATCAAGAGGAAGAACCTCTCTACTCCAAAACCCCAAAACACCCTTCGCATTCGCTCTTCTCTTCGCCGACGCACTCCTCGTCTTCCTCATAATCGCATTCGTCCCCTATACGAAGATAGATTGGGACGCTTACATGTCACAGGTTACCGGGTTTCTCGAAGGAGAGAGAGATTACCGCAACCTTAAGGGAGACACTGGTCCTCTTGTTTACCCTGCAGGTTTTCTATACATTTACTCTGCATTTCAGTATCTCACTGGAGGACAAGTTTACCCTGCCCAGATTTTGTTCGGAGTGTTGTATATCATTAACCTAGCTATCGTTCTCGCCATCTATGTCAAGACCGATGTGGTTCCGTGGTGGGCACTCTGCTTGCTTTCTCTGTCGAAAAGAGTGCATTCCATCTTCGTGCTTCGTCTATTCAATGATTGTGTGGCGATGACACTTCTTCATGCTGCATTGCTCTTGCTCGTGCACCGAAGGTGGAATCTTGGGTTGATTTTGTTTAGTGGAGCTGTTTCGGTGAAGATGAATGTGCTTCTTTATGCTCCACCTTTACTGCTCCTCATGCTCAAGGCTATGGATATCAGTGGTGTGTTATTGGCATTAGCTGGTGCAGCACTGGTTCAGATATTATTGGGGCTTCCTTTCCTGGTTTCGTATCCAATTGCATACATATCAGGTGCCTTCAATCTTGGCCGTGTCTTCATCCATTTCTGGTCTGTTAACTTCAAATTCATCCCTGAACCAGTATTTGTGTCCAAGGGATTTGCAATCTTTTTGTTGGCTGCCCACCTGCTATCACTTGCTGCATTTGCGCATTATAGTTGGTGCAAACATGAAGGAGGGCTATGCAACTTTCTGCATTCTAGATATGTCTTTATGAGACTGAGGTTTGCGCTTTTCTTCTCTTCCACTTTTTCTAAGAAGGTTGGCAAGAGCAGTTCATCATCCCTCAAGGTCCTTACTAAAGAACATATTGTGACAACTATGTTTGTCGGGAACTTCATTGGCATTGTATGTGCTCGGTCATTGCATTACCAGTTCTATTCATGGTACTTCTATAGCTTACCTTACTTGTTGTGGAGAACGCATTACCCAACATTGCTGCGTTTGATTTTGTTCGTGGGAGTGGAGCTGTGCTGGAATATCTATCCTTCTAACAGCCTTTCTTCTGCGCTACTTCTCTGCCTTCACTTAATTATTCTATGGGGTTTGTGGTCTGCTCCGACAGAGTATCCTTATGCAGAAAGTAAACCATCCTCTCACAAAAACAAATAG 1359 0.4481 MEIGGRKLKSRETMAVKSVTQSSPPPRSRGRTSLLQNPKTPFAFALLFADALLVFLIIAFVPYTKIDWDAYMSQVTGFLEGERDYRNLKGDTGPLVYPAGFLYIYSAFQYLTGGQVYPAQILFGVLYIINLAIVLAIYVKTDVVPWWALCLLSLSKRVHSIFVLRLFNDCVAMTLLHAALLLLVHRRWNLGLILFSGAVSVKMNVLLYAPPLLLLMLKAMDISGVLLALAGAALVQILLGLPFLVSYPIAYISGAFNLGRVFIHFWSVNFKFIPEPVFVSKGFAIFLLAAHLLSLAAFAHYSWCKHEGGLCNFLHSRYVFMRLRFALFFSSTFSKKVGKSSSSSLKVLTKEHIVTTMFVGNFIGIVCARSLHYQFYSWYFYSLPYLLWRTHYPTLLRLILFVGVELCWNIYPSNSLSSALLLCLHLIILWGLWSAPTEYPYAESKPSSHKNK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02839 452 PANTHER DOL-P-MAN:MAN(5)GLCNAC(2)-PP-DOL ALPHA-1,3-MANNOSYLTRANSFERASE 30 451 - -
Cca03g02839 452 PANTHER NOT56 - RELATED 30 451 IPR007873 GO:0000030
Cca03g02839 452 MobiDBLite consensus disorder prediction 1 34 - -
Cca03g02839 452 Pfam ALG3 protein 45 418 IPR007873 GO:0000030
Cca03g02839 452 MobiDBLite consensus disorder prediction 14 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02839 Cca-Chr3 49739441 49744308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02839 14 452 Miscellaneous Gene Families AT2G47760 69.507 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02839 K03845 - gmx:100785253 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02839 03 49739441 49744308 Cca03g02839 03 49739441 49744308 ECH