Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02838 ATGCAGACACCTCTCCGGCCGCCACGAGGAAGAGCAGCGGAGGAGGCAAACGAAtgctacgATTCTGCTTCCCTCCCTCTCTCGCTTTCCGCTTTATCAGCTTCCATAGCTTCCAATCATGCTCTTACTACGGCAACGGCAAGGCCCTTCTGGTTCCCACCCTCATGGGCCCTACACTTGACGTGTCCGGCTTCAAGCTTCTTGATGGGCCTCGCCGCCTGGATGGTCTGGGCCGACGGAGGCTTTCACAGGAACCCCACGGCTCTCTTTCTTTACTTCACTCACCTCCTTCTCGCAGTACTGTGGGATCCTCTTGTCTTCGCCGCTGGGGCCACACGTCTCGGCTTCATCCTCTCTTTAGCCTTGCTTCTCACCCAGCTCGCCTGCTTCCGTGCGTTTCGCCCCGTCAATCCCATCGCCGCTGATCTCGTCAAGCCTTCTTTGGCATGGATCGCTTTTCTGTCTCTTGTAAATCTTAAGCTCCTTTTTCTCTGA 495 0.5535 MQTPLRPPRGRAAEEANECYDSASLPLSLSALSASIASNHALTTATARPFWFPPSWALHLTCPASSFLMGLAAWMVWADGGFHRNPTALFLYFTHLLLAVLWDPLVFAAGATRLGFILSLALLLTQLACFRAFRPVNPIAADLVKPSLAWIAFLSLVNLKLLFL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02838 164 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 42 163 IPR004307 GO:0016021
Cca03g02838 164 Pfam TspO/MBR family 25 162 IPR004307 GO:0016021
Cca03g02838 164 CDD TSPO_MBR 47 159 IPR004307 GO:0016021
Cca03g02838 164 PANTHER TSPO/MBR FAMILY PROTEIN 42 163 - -
Cca03g02838 164 Gene3D TspO/MBR protein 20 164 IPR038330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02838 Cca-Chr3 49735789 49738301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02838 K05770 - gmx:100785785 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02838 03 49735789 49738301 Cca03g02838 03 49735789 49738301 ECH