Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02836 ATGGAATTGTGTCATTGTTCGACTTTTCTTCTTCCGCCGGAGAGCCCCAACGCGACGTGTTCTCTTTCTCTTAACTACGCTCTTGTTATTCTCAACCAAAGCCTCCCGAGATTCGCTCCTCTGCTTTGGGACCACGCTCATGTACGAGTGTGCGCTGATGGAGGTGCCAATAGGGTGTATGATGAAATGCCTCTTTTCTTCCCACATCAACAACCTTCCCATGTTCGCACCAGGTTCAAGCCTGATGTTATCAAAGGAGACATGGATTCAATCAGGAAAGAAGTACTTGACTTCTATGCAAAACTGGGAACTAAGATAATTGACGAGTCTCATGATCAGGACACCACTGATTTACACAAATGTGTTGCATACATACGTGACCTCACCCCTGATACTGATCGATCAGCTCTTTGCATTCTTGTTGCTGGAGCACTTGGTGGGAGATTCGACCATGAGATTGGAAATATTAATGTGCTTTGCCGATTTTCAAACACACGAATTATCCTTCTATCTGATGATTGCCTCATTCACCTTCTTCCAAAGACCCACTGTCATAAAATCTTTATTCAATCTTCTGTTGAGGGTCCGCATTGTGGACTCATTCCCATTGGGATGCCGTCTGGAAGTTCTACTACCACAGGACTGAAGTGGGACCTCAAAAACACGGCAATGAGATTTGGAGGTTTAGTAAGCACATCAAATATTGTAAAAGGGGAAATCGTCACAGTACAGTCTGATTCAGATCTTCTTTGGACTATTTCTATCAAGAAGCTCTAG 777 0.4389 MELCHCSTFLLPPESPNATCSLSLNYALVILNQSLPRFAPLLWDHAHVRVCADGGANRVYDEMPLFFPHQQPSHVRTRFKPDVIKGDMDSIRKEVLDFYAKLGTKIIDESHDQDTTDLHKCVAYIRDLTPDTDRSALCILVAGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIHLLPKTHCHKIFIQSSVEGPHCGLIPIGMPSGSSTTTGLKWDLKNTAMRFGGLVSTSNIVKGEIVTVQSDSDLLWTISIKKL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02836 258 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 25 175 IPR036759 GO:0004788|GO:0005524|GO:0009229
Cca03g02836 258 Gene3D - 167 257 - -
Cca03g02836 258 PANTHER THIAMIN PYROPHOSPHOKINASE 3 256 - -
Cca03g02836 258 SMART TPK_B1_binding_a_2_a 185 249 IPR007373 GO:0009229|GO:0030975
Cca03g02836 258 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 28 253 IPR006282 GO:0004788|GO:0006772
Cca03g02836 258 CDD TPK 27 253 IPR007371 GO:0004788|GO:0005524|GO:0009229
Cca03g02836 258 PIRSF TPK1 4 258 IPR016966 GO:0004788|GO:0005524|GO:0009229
Cca03g02836 258 PANTHER THIAMINE PYROPHOSPHOKINASE 1 3 256 - -
Cca03g02836 258 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 185 250 IPR007373 GO:0009229|GO:0030975
Cca03g02836 258 Pfam Thiamin pyrophosphokinase, catalytic domain 41 167 IPR007371 GO:0004788|GO:0005524|GO:0009229
Cca03g02836 258 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 177 257 IPR036371 GO:0009229
Cca03g02836 258 Gene3D Thiamin pyrophosphokinase, catalytic domain 26 166 IPR036759 GO:0004788|GO:0005524|GO:0009229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02836 K00949 - gmx:100786303 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02836 03 49724102 49727611 Cca03g02836 03 49724102 49727611 ECH