Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02833 ATGAGTCTTCACCCTGAGGTTAAGTGGGCTCAGAGAGTTGACAAGGTTTATATCACGGTGCAATTAGCCGATTCCAAAAATGCAAAAGTGGATCTTACGCCAGAGGGTGTTTTTACCTTCTCTGGCAGTGCTGGTGCTGCAGACCGTCAGTATGAGCTTAAACTGGAGCTCTTTGACAAGGTTAACGTAGAGGAGAGCAAAATTAATGTAGGAGTGCGAAGCATATTCTGTGTAGTGCAGAAGGCAGAGAATGGATGGTGGAAAAGGTTACTGCGTGCAGAAGGCAAGCCTCCACATTACGTGAAAGTAGATTGGGATAAATGGGTGGATGAGGATGAAGATGATGGTAACGGTGAACTGGACTTGGGAGGGATGGATTTCTCGAAATTTGGCGGGATGGGTGCTGATGCAATGGGAGGAATGGGAGGAATGGACTTCTCTAAATTTGGCGGAATGGGTGGTGATGATGCAATGGATGACATTGATGAGAGCGATGATGAAGAGCAAGAAGTGTCAAAGCCTGTAGAACAAGAGGCTGGCGAGGCATCTACAGAGAAAAAAGAGGCTGCTCCGAGCACATAA 582 0.4691 MSLHPEVKWAQRVDKVYITVQLADSKNAKVDLTPEGVFTFSGSAGAADRQYELKLELFDKVNVEESKINVGVRSIFCVVQKAENGWWKRLLRAEGKPPHYVKVDWDKWVDEDEDDGNGELDLGGMDFSKFGGMGADAMGGMGGMDFSKFGGMGGDDAMDDIDESDDEEQEVSKPVEQEAGEASTEKKEAAPST 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02833 193 ProSiteProfiles CS domain profile. 2 91 IPR007052 -
Cca03g02833 193 Pfam CS domain 6 81 IPR007052 -
Cca03g02833 193 Gene3D - 3 122 IPR008978 -
Cca03g02833 193 MobiDBLite consensus disorder prediction 156 172 - -
Cca03g02833 193 PANTHER BNAC05G01500D PROTEIN 1 153 - -
Cca03g02833 193 MobiDBLite consensus disorder prediction 149 193 - -
Cca03g02833 193 CDD p23_hB-ind1_like 5 113 - -
Cca03g02833 193 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 1 153 IPR045250 GO:0051879
Cca03g02833 193 SUPERFAMILY HSP20-like chaperones 1 141 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02833 Cca-Chr3 49709384 49712905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02833 - - gmx:100796372 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02833 03 49709384 49712905 Cca03g02833 03 49709384 49712905 ECH