Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02829 ATGGCGACGAATGTGTCAGAGAAGCAAGTGATGGTGGTTGGAGTCGACGACAGCGAGTTTAGCCTCTACGCTCTCCATTGGACTCTCGATCACTTGCTATCCCCTGCTTCCAATTCTACCTTCAAGCTTGTTCTTTGTCATGCCAAACCTACTGTTTCCGCTTCTGTCGGTTTTGTTGGCCCTGGTGCTGCTGAGGTCTTACCTATTGTCGATGCTGATTTGAAAAGAACCGCGGCCAAAATCACCGACAATGCTAAAGAAATATGCAAGAACAAATCTGTAAATGACGTAGTAGTGGACGTGGTGGAAGGTGATCCTAGAAATGTTCTCTGTGAAGCTGTTGAGAAGCACCATGCTTCAGTGTTAGTTGTGGGTAGTCATGGTTATGGGGCTCTAAAAAGGTACGCGTTCATTCTAGTCCTAGTTATCTTTCTATTTCTTTGTAATGTACTAATGTTGTAG 462 0.4481 MATNVSEKQVMVVGVDDSEFSLYALHWTLDHLLSPASNSTFKLVLCHAKPTVSASVGFVGPGAAEVLPIVDADLKRTAAKITDNAKEICKNKSVNDVVVDVVEGDPRNVLCEAVEKHHASVLVVGSHGYGALKRYAFILVLVIFLFLCNVLML 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02829 153 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 135 - -
Cca03g02829 153 CDD USP_Like 11 134 - -
Cca03g02829 153 Gene3D HUPs 1 141 IPR014729 -
Cca03g02829 153 Pfam Universal stress protein family 10 136 IPR006016 -
Cca03g02829 153 PANTHER - 6 135 - -
Cca03g02829 153 PANTHER UNIVERSAL STRESS PROTEIN A-LIKE PROTEIN 6 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02829 Cca-Chr3 49638773 49640830 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02829 - - gmx:100306046 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02829 03 49638773 49640830 Cca03g02829 03 49638773 49640830 ECH