Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02828 aTGGGTAGTAGTAGTAGGGAAGAGAAAAACGTGTTTTCGGAACTGACCGACGACATCGTTTTGAACATCTTCTTCAACCTGGAAGAGGATCCTCGCCACTGGGCACGCCTGGCCTGCGTCTGCACCAAATTCTCCGCCCTCATCCGGGACTTCTGCTGGAAGACCAAGTGCTCCGGCACCATCCCCTCCGACCTCCTCTCCGCCGCAGATCCCCCTCTCTCCCTCCACAAGCTctccgtctgctgccccggcctccgccacgccggcctccTCTTCGACACCTCCGATTTCGGCCTGGAACGCGACCTCGGCCCCGACActccctctccctctccctctccctcCGACCCTCCGCCACCGCCCGCACCTCCTCAGTCGCACGATTCCAACTCCTCCTGCTGGTCCCTCTTCGATGACCTCTACTACGACACGCTCTACGACGCCTCCGAGTCCGATGCGCCGCGATTCGCGGAAACGGTTAGCGAGGGCGTGGTTTCCGTGGGCGCGTGCAAGAGGCGGAAGGTGTCCCGCGCGTGGAGGTCGCACCTGGCGTCGGGGAGCTGGAGCCTGAGCCGCGAGCAGGGGAGCAAGCTCCTGGCGCGGCAGTTCCGCGACGACTGCCTGTACGTGTGCGACTGGCCCGGCTGCGTCCACAAGGAGGAGAAGCGCAAGTACCGCCTCTTCCGAGGGGTTTTCAAGAACTTCAAGCGCACTAGGGTTTGGAGAACCATTCACGATGGTAACAAGATGAAGCTTGATTTGCCCTGCGCCTTTTGTGCCTGCATGTTCACCTGGGATCTCCACTCCGCCTTTTGCTTGAGGCGCGGCTTTGGCTTCCACGACGACGGCGAGCCTGTCGTTCGGGCTTACGTTTGTGAGAACGGTCACGTTTCCGGCGCCTGGACCGATGTTCCCTTGTACACTTAA 927 0.5663 MGSSSREEKNVFSELTDDIVLNIFFNLEEDPRHWARLACVCTKFSALIRDFCWKTKCSGTIPSDLLSAADPPLSLHKLSVCCPGLRHAGLLFDTSDFGLERDLGPDTPSPSPSPSDPPPPPAPPQSHDSNSSCWSLFDDLYYDTLYDASESDAPRFAETVSEGVVSVGACKRRKVSRAWRSHLASGSWSLSREQGSKLLARQFRDDCLYVCDWPGCVHKEEKRKYRLFRGVFKNFKRTRVWRTIHDGNKMKLDLPCAFCACMFTWDLHSAFCLRRGFGFHDDGEPVVRAYVCENGHVSGAWTDVPLYT 308
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02828 308 MobiDBLite consensus disorder prediction 107 126 - -
Cca03g02828 308 MobiDBLite consensus disorder prediction 101 130 - -
Cca03g02828 308 Gene3D - 2 97 - -
Cca03g02828 308 SUPERFAMILY F-box domain 7 87 IPR036047 GO:0005515
Cca03g02828 308 PANTHER EID1-LIKE F-BOX PROTEIN 2-RELATED 6 308 IPR040267 -
Cca03g02828 308 PANTHER PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN 6 308 - -
Cca03g02828 308 Pfam F-box domain 12 51 IPR001810 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca03g02828 Cca-Chr3 49635170 49636610 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02828 - - gmx:100789324 491.5