Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02825 ATGGATCTAGACTTTGAATATCAAGAGGAATATTGGAAGAATTCAAGGGGAGTGCAACTCTTCACTTGCAAATGGGTGCCTTTCTCTTCTCCAAGGGCCCTCGTTTTCCTCTGCCATGGTTATGGCATGGAGTGCAGTCGTTTCATGAGAGAATGTGGGGTACGGCTAGCGTGTGCCAAATATGCTGTGTTCGGAATCGATTATGAAGGGCATGGAGGTTCTGAAGGAGCTCGTTGTTACATTAAGAAGTTTGATAACATCGTTAACGATTGTTATGACTTTTTCAAGTCAGTTAGCGAGCTCCCAGAGTACAAGGGAAAGGGTAGGTTCTTGTATGGAGAGTCCATGGGAGGGGCAGTGAGCCTACTTTTACATAGAAAGGACCCTTCATTCTGGGACGGTGCGGTTCTCATCGCCCCCATGTGTAAGATATCAGAGAAGGTGAAGCCACACCCGGTGGTGGTCAACATATTGACTAAAGTGGAAGACATAATCCCAAAGTGGAAGATTGTTCCCACAAAGGATGTCATCAATTCAGCCTTCAAAGACCCTGCCAAACGCGAAAGGATAAGAAAAAACAAGTTGATATACCAGGACAAACCCAGGTTAAAAACAGCATTAGAAATGTTGAGAATCAGCATTAGCCTTGAAGACAGCTTATATAAGGTGACTCTGCCGTTTTTTGTATTGCATGGAGAAGCAGACACAGTGACTGACCCAGAAGTAAGCAGGGCATTATATGAGCGAGCAAGTAGCAAAGATAAGACCATAAAATTGTACCCGGGAATGTGGCATGGCTTAACTTCGGGGGAAACGGATGACAACATCGAAAAAGTCTTTGCAGATATTATAATGTGGCTAGACATGCACACGAGCAATGCCACTTGTGAGTCCCCAAAACAATTTGAGACTACTTATAACTATGGCATTGAGAGATTGACCACAGTTGCATCACAAGCAAAGATTCTGCAGCAACAAAGGAAGGGGCGAAGAAGCTATCTGTGTGGGTTGAAAAGAAGCCGTTTGCAACACCACTCTGCAATTTAG 1047 0.4432 MDLDFEYQEEYWKNSRGVQLFTCKWVPFSSPRALVFLCHGYGMECSRFMRECGVRLACAKYAVFGIDYEGHGGSEGARCYIKKFDNIVNDCYDFFKSVSELPEYKGKGRFLYGESMGGAVSLLLHRKDPSFWDGAVLIAPMCKISEKVKPHPVVVNILTKVEDIIPKWKIVPTKDVINSAFKDPAKRERIRKNKLIYQDKPRLKTALEMLRISISLEDSLYKVTLPFFVLHGEADTVTDPEVSRALYERASSKDKTIKLYPGMWHGLTSGETDDNIEKVFADIIMWLDMHTSNATCESPKQFETTYNYGIERLTTVASQAKILQQQRKGRRSYLCGLKRSRLQHHSAI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02825 348 Gene3D alpha/beta hydrolase 5 300 IPR029058 -
Cca03g02825 348 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 8 304 - -
Cca03g02825 348 Pfam Serine aminopeptidase, S33 30 270 IPR022742 -
Cca03g02825 348 PANTHER PHOSPHOLIPASE-RELATED 8 304 - -
Cca03g02825 348 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Cca03g02825 348 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Cca03g02825 348 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Cca03g02825 348 SUPERFAMILY alpha/beta-Hydrolases 5 288 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02825 Cca-Chr3 49604215 49608138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02825 48 348 Acyl Lipid Metabolism Gene Families AT2G47630 64.452 1.24e-149 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02825 K18368 - mnt:21389635 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02825 03 49604215 49608138 Cca03g02825 03 49604215 49608138 ECH