Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02824 ATGGGAGAAAGGAAGCGGAAGGAGAGAGGCGAAGGTAACAACCAAAGCCAGAAATCGAAGAGAAAACCAAACGATAAACGGAAGAAGAGAGGCCCTCGTTTGCCCTCATCTCTGCAAAAACAGCTCGAAAGTTTAAACCCTCCCACTTCCTACGACAGCGTCGATTCCGACGACGACAATGATGTATACGAATACGAGGAAGAACGTGCTGAGGAAGAGTCCACCAGGAATAAGCGTTACGACCCTGCTTCCGTCAACGATGACCTTTCTCAAGTGCTCGAGGATGAGAATGTGCAATCTGATGATGAAAGTGAGGATGATGATCACATTGGGACAGAGAGGAATGGTAACGCTATGACTGACGATTCTGGAGAGGAAGATGACGGAAGGCATGGAAGGATGTTACAAGCAATAACTGGTATGCCGAGTGAGGCGTTTGAAGAGAACAAGAAGAAAAAAAAGATGATGGACAATATTATACCAGAGCTGTATCCAGAGTCTGAATATAATCCTAGTCGCGATGTTATGGATGGTGATGGACGCATTAGCATAGATGACCTACTGGATTCTCTTCGTGAAAAACCTGGTTATGGAAAACTTAGGAAGAGATCAGATCGAATTAATAAGAATTCTAGAACTATGCATGCACCACTTTCAAAGGCAGTTCAAGCAAAGGTAGAGAGGAAGGCAGCATATGAAACATCAAAGAAAGATGTCACTAAGTGGCAGCCTATTATTCAGAGAAATAGAGAGGCACAAACTATTTTTTTTGATGAAAATGTAGACTTAGGGTTTTCAACTATAGGAGCAATAGCTTCCGAATTTGAACCCAGAACTGAATTTGAGAAGAAAATAGCTGCACTAGTTCATGATGACAAAGTTATGGAAGCTCATAAACAGGATGGATCTAAGCTTCTAGAAATGAACGAGGTCTCTGTTGAAGATGAGAAAGATAGGCAAAATCGGATTGCTAAATTGCGGAGCCTTTGTTTTCGTCATGAAATGAAGGCAAAGCATATTAAAAAGATAAAGTCCAGAACATTTCATCGTTTGTTGAAGAAAGATAAATTAAAGGCAGAAGCTTCTCAGATACAAATGGACCCTGAAGCTGCCGAGGAATTTGCCATGAAACGAGAGCGTCAAAGAGCAGAGGAACGCATGACACTGAAGCACAAAAACAAGAATCGGTGGGCTAAGCGTATCCTACAGCGTGGTTTAAGTAGTCAGGATGAAGGAACTCGCGCTGCCATTGCTGAACAACTTCAAAAGCATTCTGATTTGACTAGAAAAATGCAAACCATGGAGGGTAGCAGCAGTAGCAGTGAAGATACCAGTGATGAGGATGATGAGAACTCTGCTGGTTCTGATCAGGATAGGACTCGCAAGGTTTTGGAAAAAGCGAAAGAAAAAACAATGAAAGTGTTGGATGAAGAGGATGAAGTTCCCAAATCAGGATTGCTTTCTTTGCCTTTTATGAGGCGCGGATTGGAGAAAAAAAGAGAGGCAGTTGTTGAAGAAGCCAACCTTGCATCCCAAGAATATGAAAATCTGTTGAATTCTGGTGGCTCAGAAGATCCAAAAGTGGCTTCTACCAGTGGTAGAAGAGTATTTGGAACATCAAAAGCCCAGATATCTGATACGAGTAATAAGGGTAAATCAGATAACTTTTATGGTGGCAGTGATAGTGAGGATGACTTGGGGACCAGCAAAAGTGGCAGCATTGAGAATGAGGGAAGTGGGCTTTTGCATAAGGATGTAAACAATGATTCAGTTGTAATTCAAGAAGACACTGATACTCACCAGGAATCTGTATTTAAGAACATTGATGAGATTATTAAGAATCCTGGGCCAAAAACTACATATGAAGTTTCTATATTTGTGTCGGATGCATGGAAAAAGGCAAAAAACCAAAATGAAGACAGAACTATCAAGAAGTCTCCAAAGCTTAATGGGCCTGTTAAGCAAAATATACAAGATACTGAAAAGGAATTTGGAGAGGATAGTGATACAGATAGTGAAGGACAGATGGTGGATGGAATTCTTTCTTCTGTTTCTAAAGTGTCGTATGAACTTCCATCTCAAGAGGAGCTCATTCAGCAAGCTTTTGCTGGGGATGATGTAGAAGATGATTTTGAAAAAGATAAGCAGGAGGTCCTCAACGAAGAAAATCCTGAGCCAGAAAAGCCTCTATTACTTCCTGGCTGGGGCCAGTGGACACATATACAGCAAAAAAAAGGTTTACCATCTTGGATGTTGAAAAAACATGAAGATGCCCGGAAGAAGAGGGAAGAATCCCTCAAAAAGAGAAAGGATGTTCAACTAAAAAATGTGATTATATCTGAAAAGATAGATAAGAAGGCTGAGAAACTACATACTAAATCATTGCCATACCCTTTTACTTCCAAAGAGGTATTTGAACAAAGCATGCGGGTGCCCATCGGTCCTGAATTTAATCCAGCAACTGCAATTGGTCCTCTTAACCGGCCTGAAgtggtgaagagaccaggtgttattataaaaccaatagagtttgaagatgtaaatcctcatgagaaaacagagcaacggagcggagataagcaaaagttgaagagaaataaaggcaatgatggtaatcccaagaaaaaggcgaaagtgGGGGGAAAAATTTAA 2652 0.3884 MGERKRKERGEGNNQSQKSKRKPNDKRKKRGPRLPSSLQKQLESLNPPTSYDSVDSDDDNDVYEYEEERAEEESTRNKRYDPASVNDDLSQVLEDENVQSDDESEDDDHIGTERNGNAMTDDSGEEDDGRHGRMLQAITGMPSEAFEENKKKKKMMDNIIPELYPESEYNPSRDVMDGDGRISIDDLLDSLREKPGYGKLRKRSDRINKNSRTMHAPLSKAVQAKVERKAAYETSKKDVTKWQPIIQRNREAQTIFFDENVDLGFSTIGAIASEFEPRTEFEKKIAALVHDDKVMEAHKQDGSKLLEMNEVSVEDEKDRQNRIAKLRSLCFRHEMKAKHIKKIKSRTFHRLLKKDKLKAEASQIQMDPEAAEEFAMKRERQRAEERMTLKHKNKNRWAKRILQRGLSSQDEGTRAAIAEQLQKHSDLTRKMQTMEGSSSSSEDTSDEDDENSAGSDQDRTRKVLEKAKEKTMKVLDEEDEVPKSGLLSLPFMRRGLEKKREAVVEEANLASQEYENLLNSGGSEDPKVASTSGRRVFGTSKAQISDTSNKGKSDNFYGGSDSEDDLGTSKSGSIENEGSGLLHKDVNNDSVVIQEDTDTHQESVFKNIDEIIKNPGPKTTYEVSIFVSDAWKKAKNQNEDRTIKKSPKLNGPVKQNIQDTEKEFGEDSDTDSEGQMVDGILSSVSKVSYELPSQEELIQQAFAGDDVEDDFEKDKQEVLNEENPEPEKPLLLPGWGQWTHIQQKKGLPSWMLKKHEDARKKREESLKKRKDVQLKNVIISEKIDKKAEKLHTKSLPYPFTSKEVFEQSMRVPIGPEFNPATAIGPLNRPEVVKRPGVIIKPIEFEDVNPHEKTEQRSGDKQKLKRNKGNDGNPKKKAKVGGKI 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02824 883 MobiDBLite consensus disorder prediction 844 877 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 1 20 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 515 576 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 515 603 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 69 83 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 709 724 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 422 492 - -
Cca03g02824 883 PANTHER U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 16 860 IPR006709 GO:0006364|GO:0032040
Cca03g02824 883 Pfam Utp14 protein 133 844 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 454 483 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 589 603 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 709 733 - -
Cca03g02824 883 Coils Coil 493 513 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 636 656 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 377 396 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 377 391 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 94 108 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 842 883 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 37 53 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 109 130 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 1 130 - -
Cca03g02824 883 MobiDBLite consensus disorder prediction 54 68 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02824 K14567 - gmx:100784007 1387.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02824 03 49580335 49586869 Cca03g02824 03 49580335 49586869 ECH