Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02819 ATGGAGAAAATAGAGCACACAACGGTGAACACCAATGGAATAAACATGCACGTCGCATCAATTGGCTCGGGCCCCGCGATACTGTTCCTCCACGGCTTCCCGGAGCTTTGGTACTCATGGCGCCACCAGCTTCTCTCCCTCTCCGCCGCGGGCTACCGCGCCATCGCCCCCGACCTCCGCGGCTACGGCGACACCGACGCTCCGCCCTCGGCTTCCTCCTACTCGGCCCTCCACATCGTGGCCGACCTCGTTGGGCTTCTGGACGCTCTGGGCATCGACCAAGTGTTTCTAGTGGGCCATGACTGGGGAGCCTCCATGGCCTGGCATTTCTGCTTGCTTAGGCCCGATCGCGTTAAGGCCCTCGTCAACATGAGCGTCGTCTTCCCCCCCAGAAACCCTAAACGAAAGCCCACTCAGAGCCTCAGAGCCATCTTCGGCGATGATTACTATATTTGCAGGTTCCAGAAACCTGGGGAGGTTGAAGAAGAGTTTGCTCGTGCTGGTGCTGCCAGAATAATAAAGACATTTCTTACATGTCGCGATCCACGACCACCTTGTGTGCCTAAGGAGATAGGATTTGGGGGCCCGCCTCACCTTCCCATTCATTTGCCTCCGTGGCTGTCTGAAGAAGATGTCAATTACTATGCCACCAAATTTCACCACAAAGGCTTCACCGGTGGCCTCAACTACTATCGCGCTATGGACTTAACTTGGGAGCTCACAGCAGCATGGACTGGAGTACAGATCAAGGTGCCGGTCAAGTTTATTGTGGGAGACCTTGACATAACATATACTCCAGGTGCTAAGGAGTATATACGTAATGGTGGCTTTAAGAAACACGTACCGTTCTTGCAAGAATTGGTTGTGATGGAAGGAGTTGCTCACTTTATAAATCAGGAAAGACCAGAAGAGATCAGCGCGCATATATACGACTTCATCAAGAAATTTTAA 951 0.5279 MEKIEHTTVNTNGINMHVASIGSGPAILFLHGFPELWYSWRHQLLSLSAAGYRAIAPDLRGYGDTDAPPSASSYSALHIVADLVGLLDALGIDQVFLVGHDWGASMAWHFCLLRPDRVKALVNMSVVFPPRNPKRKPTQSLRAIFGDDYYICRFQKPGEVEEEFARAGAARIIKTFLTCRDPRPPCVPKEIGFGGPPHLPIHLPPWLSEEDVNYYATKFHHKGFTGGLNYYRAMDLTWELTAAWTGVQIKVPVKFIVGDLDITYTPGAKEYIRNGGFKKHVPFLQELVVMEGVAHFINQERPEEISAHIYDFIKKF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02819 316 Gene3D alpha/beta hydrolase 1 316 IPR029058 -
Cca03g02819 316 PRINTS Alpha/beta hydrolase fold signature 51 66 IPR000073 -
Cca03g02819 316 PRINTS Alpha/beta hydrolase fold signature 97 110 IPR000073 -
Cca03g02819 316 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Cca03g02819 316 Pfam alpha/beta hydrolase fold 25 130 IPR000073 -
Cca03g02819 316 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2-LIKE 1 316 - -
Cca03g02819 316 PANTHER EPOXIDE HYDROLASE 1 316 - -
Cca03g02819 316 PRINTS Epoxide hydrolase signature 31 49 IPR000639 GO:0003824
Cca03g02819 316 PRINTS Epoxide hydrolase signature 51 66 IPR000639 GO:0003824
Cca03g02819 316 PRINTS Epoxide hydrolase signature 97 110 IPR000639 GO:0003824
Cca03g02819 316 PRINTS Epoxide hydrolase signature 111 124 IPR000639 GO:0003824
Cca03g02819 316 PRINTS Epoxide hydrolase signature 251 267 IPR000639 GO:0003824
Cca03g02819 316 PRINTS Epoxide hydrolase signature 290 312 IPR000639 GO:0003824
Cca03g02819 316 SUPERFAMILY alpha/beta-Hydrolases 2 315 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02819 Cca-Chr3 49546225 49548628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02819 1 316 Acyl Lipid Metabolism Gene Families AT4G02340 71.924 2.44e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02819 - - gmx:100799903 579.711