Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02797 ATGGCCGTAAATTTGAGGATCATTTGTTTAGCAAAAGAGCCTGGAAGGTGTAGCTGGGACGAAAAGCGAAATATGGTTGTTGCTGATAATAATGTTTGGGATGAATATCTCAAGGCAGATGCGAATGTGCGATCATGCAGGGTTAAAAGCATCCCCTGTTTCAAAGATTTGTGTACTATTTATGAACATGTGATGGAAGGAAAATGTAGGTGTTTTTTGGAATGGTCATCTAATTCTGGCGAACATGGAGCAATCAAACCCTGTCTATCTAAGGATGTCTGTGAGGATGCTGATGAGCTTCTTTGTGATGTTGGGGCTGATGAAGACTGTGGAATCTCTAGCAATGACAGTACAACCAATGATTGTGAGCAAAGGGTGCCAAATGAAACAACATCCACTTTTGGTACACGGACCCGGACTTGTTGGCATCCACCAGTGGATCGTTACTTCATCAACTTAATGCTTGCCCATGAGCACAAAGGGAATCAATTTGAAGGGGTCTTCAGAAAACAAGCATGGATGGAGATGATTTCATCATTCAATGAAAATTTTGGTCTTGAGTATAATTCGGAGATTCTTAAGAATAGGTACAAAACTCTGAGAAGGCAATACAATTTAATTAAAAGTCTTCTTCAGTCGGATGGCTTTGCCTGGGATGAAACATGCCAGATTGTTTTGGCTGATGATTGTGTTTGGAAAGATTATCTTAAGGTGCGTATCAATATAAGAAATCTGCTGGGAAATTGA 747 0.4016 MAVNLRIICLAKEPGRCSWDEKRNMVVADNNVWDEYLKADANVRSCRVKSIPCFKDLCTIYEHVMEGKCRCFLEWSSNSGEHGAIKPCLSKDVCEDADELLCDVGADEDCGISSNDSTTNDCEQRVPNETTSTFGTRTRTCWHPPVDRYFINLMLAHEHKGNQFEGVFRKQAWMEMISSFNENFGLEYNSEILKNRYKTLRRQYNLIKSLLQSDGFAWDETCQIVLADDCVWKDYLKVRINIRNLLGN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02797 248 PANTHER EXPRESSED PROTEIN 116 238 - -
Cca03g02797 248 Pfam Myb/SANT-like DNA-binding domain 142 235 IPR024752 -
Cca03g02797 248 PANTHER EXPRESSED PROTEIN 18 78 - -
Cca03g02797 248 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 116 238 - -
Cca03g02797 248 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 18 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02797 Cca-Chr3 49323190 49324428 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02797 - - ccaj:109812211 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02797 03 49323190 49324428 Cca03g02797 03 49323190 49324428 ECH