Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02794 ATGGTCAAAACGGCGTCGTCCACGTCCCCTTCTTCCTCTCCGGTGACCATAACGGTGTCGTCCGGAGGCAGACGCCGGAGCATGGGGCTGACCAGTCCCGTTGCACGCGCCTCCGTCTCCAACAACCCCAATTCTCCTCTCAGAGCTTCCGCTGCCGGCGGAAGGAGGCTCTCCGGCGGCGGCGTCGAGGAAACTAGCTCCGACTACGTGACGTACACCGTTCAAATTCCTCCGACGCCGGACCGGAAGCCGATGACAGCATCAGAGGACGGAAAGAGCAGCAGGAGTTTCATTTCCGGCACAATCTTCACCGGAGGGTTCAACTCCGTGACGCGCGGCCACGTCATGGAGTGCTCGATGGAGGGCGAGGTGCAGGCGAAAACGGCGTCGGTTTGCGGAATGAGAGGATGCGACGAGGAAGCGATGAAGGGAAGGTTGTTGGGTGGACCCTGCGAGTGCGGGTTTAGGGTTTGCAGGGACTGTTACCTGGAGTGTAGTGGAAAGTGTCCTGGGTGCAAGGAGCCTTATAAGTATGTGAGCGATGATgaggaagaggaagaggaagaggaagaggaGGGTTCTGAGGGTGAGGATCAGCCTCTGCCTCTGCCTTCCATGGCGGAGTTCAAGTTGGACAAGAGGCTTTCCCTTGTCAAGTCCTTCAAAGCGCAGAACCATCCTCCTGACTTTGACCACACAAGGTGGCTATTTGAGACCAAAGGGACTTATGGGTATGGAAACGCTGTGTGGCCTAAAGATGGCTATGGTGCTAATGGGTTTGAACCCCCTCCGGAGTTCGGAGAGAAAGCTAGGAGACCCTTGACCCGCAAGGTTGGAGTTTCAGCTGCTATTATCAGTCCTTATAGGTTGCTTATTCTGCTGCGTCTTGCTTCCTTGGGACTATTTCTCACGTGGAGAATTAGACACCCGAACCATGAAGCGATTTGGCTGTGGGCGATGTCCATAACATGTGAGCTATGGTTTGCATTTTCGTGGCTTCTTGATCAGCTTCCTAAGCTCTGTCCTGTGAACAGAGTCACTGATCTGTCTCGGTTTGAGTCTCCAAACCTGCGCAACCCGAAAGGGAGGTCTGATCTACCAGGCATTGACGTGTTTGTTTCCACGGCAGACCCAGAAAAGGAGCCTCCTCTTGTCACTGCCAACACCATTCTCTCCATCCTTGCTGTTGATTATCCTGTGGAGAAGGTTGCGTGTTACTTGTCTGATGATGGTGGAGCTCTGTTGACGTTTGAAGCTCTTGCTGAGACTGCTAGCTTTGCAAGAATTTGGGTTCCGTTCTGTCGGAAGCACCAGATTGAGCCCCGAAACCCCGAAGCTTATTTTGGACAGAAGCGTGATTTTCTTAAGAATAAGGTCCGGTTGGACTTTGTGAGAGAGAGGAGAAGGGTGAAAAGGGAATATGATGAGTTCAAAGTGAGGATAAACTCCTTGCCAGAATCCATTAGGAGAAGATCCGATGCTTACAATGCTCACGAGGAGTTGCGTGCCAAGAAGAAACAGATGGAAGCAGGTTCCAATGTGTCTGAACCCATTAAGGTTCCTAAAGCTACATGGATGTCCGATGGTTCTCATTGGCCAGGAACTTGGGCTTCAGCAGAACAAGACCACTCAAGAGGGGACCATGCTGGAATAATTCAGGCAATGTTAGCTCCACCAAATGCAGAACCGGAATTTGGGGTAGAAGCTGATGGGGAGAACTTGATTGACACAACAGATGTTGATATTAGGCTGCCCATGCTTGTTTATGTGTCTCGTGAGAAGAGACCGGGATATGATCACAACAAGAAAGCAGGAGCCATGAATGCTCTTGTTCGCACCAGTGCCATTATGTCCAATGGACCATTCATTCTTAATCTTGACTGTGATCATTACATCTACAACTCCTTGGCACTGAGGGAAGGTATGTGCTTTATGCTTGATAGGGGTGGTGATAGGATATGCTACGTTCAGTTCCCACAAAGGTTTGAGGGTATTGACCCCAGTGACAGATATGCAAACCACAACACAGTGTTCTTTGATGTGAGCATGAGAGCTCTTGATGGCTTACAGGGCCCCATGTACGTGGGAACAGGCTGCATATTCAGAAGAACTGCCCTTTATGGATTTAGTCCTCCAAGAGCCACAGAACACCACGGGTGGTTTGGCAGGAAGAAAATTAAGTTGTTTCTGAGAAAGCCAAAGGTGTCAAAAAAGGAAGAGGATGAGGTTTCCGTGCCAATAAATGGTGATCATAATGACGATGATGCAGACATAGAGTCCTTGCTTCTTCCCAAAAGGTTTGGGAACTCTTCTTCTCTCGCTGCATCGATTCCTGTGGCAGAATACCAGGGAAGGTTGCTTCAAGATTTGCAAGGAAAGGGAACACATGGAAGACCAGCAGGTTCTCTTGCTGTGCCTCGAGAACCATTGGATGCTGCCACTGTTGCTGAGGCAATAAGTGTGATATCTTGTTTCTACGAGGATAAAACTGAGTGGGGCAAACGAGTGGGGTGGATATATGGTTCAGTTACAGAAGATGTGGTGACTGGTTACAGAATGCACAATAGAGGGTGGAGATCAGTGTACTGTGTGACCAAAAGGGATGCTTTTAGAGGAACAGCTCCAATCAATTTGACAGACAGGCTCCACCAAGTGCTTCGATGGGCAACAGTGTCCCTATTTTCGGGGCAGTTTATAGTCCAAACCCTCAGTGTAACTTTTCTGGTGTTCTTGCTGGGCATCACAGTCACACTGTGCTTGCTGGCACTCCTGGAGATCAAGTGGTCAGGAATCACTCTTCATGATTGGTGGCGAAATGAACAGTTCTGGTTGATTGGTGGAACAAGTGCACACCCTGCTGCTGTTTTACAAGGGTTGTTGAAGGTCATAGCAGGAGTTGACATATCATTCACTTTAACCTCAAAGTCAGCCACTCCAGAAGAAGGAGATGATGAGTTTGCTGATCTTTATGTGGTGAAGTGGAGCTTTCTAATGGTACCTCCAATTACTATTATGATGGTGAACTCCATTGCTATTGCTGTAGGGGTAGCCAGGACTGTGTACAGTCCCTTTCCACAATGGAGCAAACTAGTAGGAGGGGTGTTTTTCAGCTTCTGGGTCTTGTGCCATCTTTACCCATTTGCAAAGGGCCTTATGGGAAGGAGAGGGAAGGTTCCAACCATCATCTATGTTTGGTCTGGATTGCTCTCCATTATTATCTCTTTGCTTTGGGTGTACATAAACCCTCCTTCAGGAAGAACACAAGATTACATGAATTTCCAATTCCCTTGA 3291 0.4862 MVKTASSTSPSSSPVTITVSSGGRRRSMGLTSPVARASVSNNPNSPLRASAAGGRRLSGGGVEETSSDYVTYTVQIPPTPDRKPMTASEDGKSSRSFISGTIFTGGFNSVTRGHVMECSMEGEVQAKTASVCGMRGCDEEAMKGRLLGGPCECGFRVCRDCYLECSGKCPGCKEPYKYVSDDEEEEEEEEEEGSEGEDQPLPLPSMAEFKLDKRLSLVKSFKAQNHPPDFDHTRWLFETKGTYGYGNAVWPKDGYGANGFEPPPEFGEKARRPLTRKVGVSAAIISPYRLLILLRLASLGLFLTWRIRHPNHEAIWLWAMSITCELWFAFSWLLDQLPKLCPVNRVTDLSRFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARIWVPFCRKHQIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMEAGSNVSEPIKVPKATWMSDGSHWPGTWASAEQDHSRGDHAGIIQAMLAPPNAEPEFGVEADGENLIDTTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWFGRKKIKLFLRKPKVSKKEEDEVSVPINGDHNDDDADIESLLLPKRFGNSSSLAASIPVAEYQGRLLQDLQGKGTHGRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATVSLFSGQFIVQTLSVTFLVFLLGITVTLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEEGDDEFADLYVVKWSFLMVPPITIMMVNSIAIAVGVARTVYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIIYVWSGLLSIIISLLWVYINPPSGRTQDYMNFQFP 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02794 1096 MobiDBLite consensus disorder prediction 180 197 - -
Cca03g02794 1096 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 891 1093 - -
Cca03g02794 1096 MobiDBLite consensus disorder prediction 1 94 - -
Cca03g02794 1096 Pfam RING/Ubox like zinc-binding domain 137 177 - -
Cca03g02794 1096 SUPERFAMILY Nucleotide-diphospho-sugar transferases 384 889 IPR029044 -
Cca03g02794 1096 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 73 892 - -
Cca03g02794 1096 MobiDBLite consensus disorder prediction 1 48 - -
Cca03g02794 1096 Pfam Cellulose synthase 369 892 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cca03g02794 1096 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 73 892 - -
Cca03g02794 1096 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 891 1093 - -
Cca03g02794 1096 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 574 721 IPR029044 -
Cca03g02794 1096 MobiDBLite consensus disorder prediction 180 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02794 Cca-Chr3 49306762 49310876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02794 63 1096 Glycosyltransferase AT3G03050 64.499 0.0 1429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02794 K00770 - gmx:100804687 2018.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02794 03 49306762 49310876 Cca03g02794 03 49306762 49310876 ECH