Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02761 ATGGAAGATTTGGGAGGTACCCGGTTCGATGGCCTCAGCAGTGCTGTGAGGAGGAAGAGGAGTCAAACTTTGCGCCGGCCACGACCTGATTCACAGCCTGCTTCAGAAGGTCAAGAAATGTCTCCCTTGTCTTCGACGCCTTCAGAGGATGTTGGCAAGGCCTCTAGTGATGAGAATGTTGGTTATGATGCGAATTCCAAGAGAAAGGAATTCAATCTTAATCACTGTGTCTCTCAAACCGTGTCTGCTACCGGAGCTGAAGATGATAAATCCCATAAAAAGAGTAAAAAGGATGGAGGGTTCCATGCGTTTTATAATAGTGAGCCTGGACGTAGTGGATTGCATAATAAACGCTGTAGTGAAGGTGTTCTTGCTCCAGCAAATTGGAAAGGTTCTAGCAAAGCAAAGGATAGCTTGGATTCAGAGTTGAGAAGCGTGGATTTATATGGTGGAAGGAATCCAGAGAGTCTGAGTTTGGGGCAATTTGGTGGCTCTCAGGATGGATTGGGGAATGAGAGCCGGGTTAAAAAGGTTAAACTCAAGGTTGGCGGGGTGACGCGTACTATTCAAGCCAATTCAGCAACCAATGGTGCTTCAGGGAGTGGGTCAACAATGAAGAGTTCTCGTTCATTGGATGCGTCCAGACCACGCCAAAAGCAACAGAGTAATTCAGACGATAATAATTCTCCTTCTGAGAAGAGGAGTGGTCTACAAGGTGTTCCGTGGAAGGATTTCTCAAGAGGTGGTTTCGGTCTTGGGAAGGAGGAATCGTCGATGGGGAAGATTTCTGGAAAGAACACATCTAGTAAGGTGGGAGACAAGTCTGAACCGGTTCGTAAGAGCAAGCGAGTACCAAAGAGACGTGTACTTGATGGAGAATTTGGcgacgatgatgacgacgacgatgaAATTCGGTACTTGGAAAAGCTGAAAACGTCCAAAGTTTCTGCAGTCTATAGAGATGAAGAAGAATTAAGCAAGAAACATCGAAAACTATCCAGTGTCTCTAATATGGAAAATGCTGCCTCAACTAGGTCAGGCAAAGACGGTAAGAAAAGGTCTAGATCTGATAGAGTGTATGAGGACACAGATTATGAGGACGAAGAGGAGTCAGGGTCTGATGGTGAGGTTGAGGATAAGAAAAAGAAAAAACAGAGGAAGGAATCTGTTGATGTATTAATGGACAGTAAGAGGGAAATGACTCTTACAACTCGTCAACGTGCCCTTCAATCAAGCAAAGATGCATCTGCATCTGGTGCTAGTTTAATCGAGTTTCCCAATGGATTACCACCTGCCCCACCTAGAAAGCAAAAGGAGAAGCTTTCAGAGGTAGACCAGCAATTGAAGAAAGCTGAGGCTGCCCAGAGGCGTAGAATGCAAGTTGAGAAAGCTGCCAGGGAATCTGAGGCTGAAGCTATCAGAAAAATACTTGGTCAAGACTCCAGCAGGAAAAAGCGAGAAGAGAAAATAAAGAAGCGCCAGGAAGAACTGGCACAGGAAAAGGCAGCCAATGCACTAATGCTTGCATCAGATACCATCAGATACACAATGGGCCCAACTGGAACAATTGTGACTTTTCCTGAGGAAATGGGGCTTCCTAGCGTATTGAACTCCAAACCTGTTAGTTATCCCCCACCTCGCGAGAAGTGTGCTGGTCCATCTTGTACAAATCCTTACAAGTATCGGGATTCAAAATCAAAGCTTCCTCTTTGCAGTCTCCAATGCTACAAGGCTGTTCAGGAGAAGGTAGCGGCTGAAACTATCTGTTGA 1770 0.4486 MEDLGGTRFDGLSSAVRRKRSQTLRRPRPDSQPASEGQEMSPLSSTPSEDVGKASSDENVGYDANSKRKEFNLNHCVSQTVSATGAEDDKSHKKSKKDGGFHAFYNSEPGRSGLHNKRCSEGVLAPANWKGSSKAKDSLDSELRSVDLYGGRNPESLSLGQFGGSQDGLGNESRVKKVKLKVGGVTRTIQANSATNGASGSGSTMKSSRSLDASRPRQKQQSNSDDNNSPSEKRSGLQGVPWKDFSRGGFGLGKEESSMGKISGKNTSSKVGDKSEPVRKSKRVPKRRVLDGEFGDDDDDDDEIRYLEKLKTSKVSAVYRDEEELSKKHRKLSSVSNMENAASTRSGKDGKKRSRSDRVYEDTDYEDEEESGSDGEVEDKKKKKQRKESVDVLMDSKREMTLTTRQRALQSSKDASASGASLIEFPNGLPPAPPRKQKEKLSEVDQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKIKKRQEELAQEKAANALMLASDTIRYTMGPTGTIVTFPEEMGLPSVLNSKPVSYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLQCYKAVQEKVAAETIC 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02761 589 MobiDBLite consensus disorder prediction 86 101 - -
Cca03g02761 589 PANTHER INO80 COMPLEX SUBUNIT B 1 589 IPR029523 GO:0006338|GO:0031011
Cca03g02761 589 MobiDBLite consensus disorder prediction 345 361 - -
Cca03g02761 589 Pfam HIT zinc finger 546 577 IPR007529 -
Cca03g02761 589 MobiDBLite consensus disorder prediction 436 495 - -
Cca03g02761 589 MobiDBLite consensus disorder prediction 403 418 - -
Cca03g02761 589 MobiDBLite consensus disorder prediction 375 402 - -
Cca03g02761 589 MobiDBLite consensus disorder prediction 320 495 - -
Cca03g02761 589 MobiDBLite consensus disorder prediction 320 334 - -
Cca03g02761 589 Coils Coil 444 471 - -
Cca03g02761 589 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 589 - -
Cca03g02761 589 SMART PAPA_1_2 445 530 IPR006880 GO:0031011
Cca03g02761 589 MobiDBLite consensus disorder prediction 71 85 - -
Cca03g02761 589 MobiDBLite consensus disorder prediction 272 293 - -
Cca03g02761 589 Pfam PAPA-1-like conserved region 446 530 IPR006880 GO:0031011
Cca03g02761 589 MobiDBLite consensus disorder prediction 1 118 - -
Cca03g02761 589 MobiDBLite consensus disorder prediction 146 303 - -
Cca03g02761 589 MobiDBLite consensus disorder prediction 34 53 - -
Cca03g02761 589 Coils Coil 483 503 - -
Cca03g02761 589 MobiDBLite consensus disorder prediction 186 235 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02761 - - gmx:100814323 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02761 03 49013910 49017146 Cca03g02761 03 49013910 49017146 ECH