Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02751 ATGGCAAATAGACCAGATCCGGATATTGATGATGATTTTCGTGAGCTTTATAAGGAGTACACTGGTCCCCTGGGATCTGCTGCCACAAACACGCAAGAGAGGGCAAAATCAAATAAAAGGTCTGATGCAGGGTCTGATGAAGAGGAGGAAGCTCGAGACCCTAATGCTGTCCCAACTGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACAGAAAGGAATTGGAAGAAAAGAAAAGAGGAGGAAATGATCTGCAAACTTTGCGGAGAATCAGGGCATTTCACTCAGGGTTGTCCATCTACTCTTGGAGCAAATCGCAAGTCTCAAGATTTCTTTGAAAGGGTACCTGCTAGAGACAAAAATGTACGAGCACTTTTCACGGAGAAAGTTATAAATAAGATTGAAAGGGATGTGGGCTGCAAAATTAAAATGGATGAAAAGTTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCCGTGCACAAGATTCGAGAGGAGGGTGATCAAAAGGGATCATCTAGTTCCCAAATGACTCGATCAAGGTCACCAGAGAGAAGTCCTGTTGGTGCTCGGTTTCAACGCTCTGAGCCCCAAAGGTCTCATTCTGGACCACGAAATACATCTCAGTTTCAGCCAAGGTTTGGTAGGCAAGAGAGAGCTGTTGAAGACCGTATCCGGGAAGACGTTCAAAAGTTTACTAGAGGTTCTCCACAAGCAAGAGCTTTTGGAAATAGTGGAGCTAGAGGTCGTTCAAGCCAGTCAAGATCTCCAAGACATGCCCCTTATACAGTGAACTCATATAATTCATTTGAAGGCCGTAATCAAAACATGGGTGCTTATAGGAATGATGGGTGGGATTCTCATAGAAGAGAATCTGTTATCCAGCCTGGTCATCAGTTTGATTATAATGCCTCACCACAGACTTTAGAAGAATTAGAGTTGGAGTATAAGAACGAGGCAACAGAGCTAATGAAAATTCGTGACAGAGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTATTAGAGATTTGAGGGAGAAGTACATGAATAAAGTTGCATTGGTAAGGGCAACACATGCAAAACAGTGGGAAGAGTTTCTTCAGCTTGATGCACAGAGGCGTCAACAGCAGGCAATCCAACAAATGTCCTCTAGTTATCGGGGTTTTAAACAGCAGAGCTTTCCTGAATATGATGGGTCCAATGTCAATCCTCCTCCCTTTACTGGGACCAATTTACCCTTGGAATCAAGGAACAGGTTCTCTGACAACATGGAAACCTATCCTACTAGGCCTCATGATAATTTTGGTGAATTTCATAGGCGGGGCGATTTTGCAAAAGCTTACAACAGATATTAA 1392 0.4296 MANRPDPDIDDDFRELYKEYTGPLGSAATNTQERAKSNKRSDAGSDEEEEARDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERVPARDKNVRALFTEKVINKIERDVGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGDQKGSSSSQMTRSRSPERSPVGARFQRSEPQRSHSGPRNTSQFQPRFGRQERAVEDRIREDVQKFTRGSPQARAFGNSGARGRSSQSRSPRHAPYTVNSYNSFEGRNQNMGAYRNDGWDSHRRESVIQPGHQFDYNASPQTLEELELEYKNEATELMKIRDREEDEENFKHREAIRDLREKYMNKVALVRATHAKQWEEFLQLDAQRRQQQAIQQMSSSYRGFKQQSFPEYDGSNVNPPPFTGTNLPLESRNRFSDNMETYPTRPHDNFGEFHRRGDFAKAYNRY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02751 463 MobiDBLite consensus disorder prediction 175 285 - -
Cca03g02751 463 PANTHER OS01G0252900 PROTEIN 1 463 - -
Cca03g02751 463 MobiDBLite consensus disorder prediction 227 244 - -
Cca03g02751 463 MobiDBLite consensus disorder prediction 35 55 - -
Cca03g02751 463 MobiDBLite consensus disorder prediction 248 285 - -
Cca03g02751 463 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Cca03g02751 463 PANTHER OS01G0252900 PROTEIN 1 463 - -
Cca03g02751 463 MobiDBLite consensus disorder prediction 204 225 - -
Cca03g02751 463 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
Cca03g02751 463 MobiDBLite consensus disorder prediction 1 18 - -
Cca03g02751 463 Coils Coil 320 340 - -
Cca03g02751 463 MobiDBLite consensus disorder prediction 1 77 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02751 - - gmx:100806099 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02751 03 48879636 48883900 Cca03g02751 03 48879636 48883900 ECH