Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02743 ATGGCCCCTGAGCTTGTCCCCACCCTGGCGAAATCCGGTGCCGCCTTCACCAAACCCGCGACTCTGGCGAGGCGCGCCTACGTCACATTCCTCGCCGGAAACGGTGACTACGTGAAAGGGGTCGTTGGCCTCGCCAAAGGGCTGCGAAAGGTGAAAACGGCGTACCCCTTGGTGGTGGCCGTGCTCCCCGATGTGCCGCAGGAGCACCGTAACATCCTGGAGTCTCAGGGCTGCATCGTCCGTGAGATCGAACCCGTTTACCCACCCGAAAATCAGACCCAGTTCGCTATGGCCTATTACGTCATCAACTATTCCAAACTCCGTATATGGGAGTTTGTGGAATATAGCAAGATGATATACTTGGACGGAGATATTCAGGTATACGAGAACATAGACCACTTATTTGATCTTCCTGATGGGAACTTTTACGCTGTGATGGACTGCTTCTGCGAGAAGACATGGAGTCACACCCCGCAGTACAAGGTGGGGTACTGCCAGCAGTGTCCGGAGAAGGTCCAGTGGCCCACTAAATTGGGCCCACCACCTTCTCTTTACTTCAACGCGGGCATGTTCGTGTTCGAGCCCAGCTTGGACACCTACCACGACCTCTTGAAGACGGTGCAAGTCACCACTCCCACATCGTTCGCGGAGCAGGACTTCTTGAACATGTACTTCAAGGACATTTACAAGCCCATTCCCTTGGCTTATAACCTTGTCCTCGCTATGCTGTGGCGCCACCCCGAGAATGTTAAACTTGACCAAGTCAAGGTCGTTCACTACTGCGCAGCGGGGTCGAAGCCGTGGAGATATACGGGGAAGGAAGAGAATATGCAGAGGGAGGACATAAAGATGCTGGTGAAGAAATGGTGGGATATCTATAACGACTCTTCCCTTGATTACAAGGGGTTGAGTGGAAGTGAAGACATGGAGCCATTCGTGCAGGCTCTATCAGAGGTTGGTCATGTTCAATATGTGACAGCACCCTCAGCTGCTTAA 996 0.5301 MAPELVPTLAKSGAAFTKPATLARRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPQEHRNILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYENIDHLFDLPDGNFYAVMDCFCEKTWSHTPQYKVGYCQQCPEKVQWPTKLGPPPSLYFNAGMFVFEPSLDTYHDLLKTVQVTTPTSFAEQDFLNMYFKDIYKPIPLAYNLVLAMLWRHPENVKLDQVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDIYNDSSLDYKGLSGSEDMEPFVQALSEVGHVQYVTAPSAA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02743 331 PANTHER GALACTINOL SYNTHASE 1 1 331 - -
Cca03g02743 331 CDD GT8_Glycogenin 25 296 - -
Cca03g02743 331 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 302 IPR029044 -
Cca03g02743 331 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Cca03g02743 331 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 300 IPR029044 -
Cca03g02743 331 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02743 Cca-Chr3 48783759 48786524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02743 1 331 Glycosyltransferase AT1G56600 74.052 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02743 K18819 - gmx:100809287 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02743 03 48783759 48786524 Cca03g02743 03 48783759 48786524 ECH