LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca03g02742	ATGGCTGCGATCGCCAGAACGCACGTGCTCGGTGTTGTGGGTTTTCAGCTCAAAGAATCTGAAATGCCTATTGCGTGTTCCTCCAGCTTAATCCGCAGGGACATTGGAGATTATCCTCAGCGCAATGTGGGTCTAAGACGCAGAAAAAATGCTACGATTCTTCCCGAGATCAGAGCCCAGAATGTTCCGGGGTATGTTCCAGAATCCCAGTTTTACAAAGTAGAAGCCATTCTCAGGTTACAAGCTTTGTTGAAAATGGGAATTCGTGGTGTCACTGTATCTGATGTCAAAGGCTTTGGTGCTCAAGGTGGTTCAAAGGAGAGGCAGGGAGGCTCTGAATTTTCTGAAGGCAATTTTGTTGCCAAAGTTAAAATGGAAATAGTAGTGAGAAAGGACCAGGTTGAGGAAGTAATTGACAAAATTATCGAGGAGGCAAGGACTGGCGAGATTGGTGATGGAAAAATTTTCTTGATCCCCGTCTCAGATGTCATAAGAATTCGGACAGGTGAACGTGGGGAGCAGGCAGAGAGGATGAGTGGGGGGCGAAGTGACATGTTATCTTCTGTATGA	570	0.4632	MAAIARTHVLGVVGFQLKESEMPIACSSSLIRRDIGDYPQRNVGLRRRKNATILPEIRAQNVPGYVPESQFYKVEAILRLQALLKMGIRGVTVSDVKGFGAQGGSKERQGGSEFSEGNFVAKVKMEIVVRKDQVEEVIDKIIEEARTGEIGDGKIFLIPVSDVIRIRTGERGEQAERMSGGRSDMLSSV	189

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca03g02742	189	PANTHER	NITROGEN REGULATORY PROTEIN P-II	39	187	IPR002187	GO:0006808\|GO:0030234
	Cca03g02742	189	SMART	P_II_3	74	169	IPR002187	GO:0006808\|GO:0030234
	Cca03g02742	189	PANTHER	NITROGEN REGULATORY PROTEIN P-II HOMOLOG	39	187	-	-
	Cca03g02742	189	PRINTS	P-II protein signature	86	104	IPR002187	GO:0006808\|GO:0030234
	Cca03g02742	189	PRINTS	P-II protein signature	116	139	IPR002187	GO:0006808\|GO:0030234
	Cca03g02742	189	PRINTS	P-II protein signature	147	167	IPR002187	GO:0006808\|GO:0030234
	Cca03g02742	189	ProSiteProfiles	P-II protein family profile.	59	176	IPR002187	GO:0006808\|GO:0030234
	Cca03g02742	189	Gene3D	-	60	185	IPR015867	-
	Cca03g02742	189	ProSitePatterns	P-II protein C-terminal region signature.	147	160	IPR017918	GO:0006808\|GO:0030234
	Cca03g02742	189	Pfam	Nitrogen regulatory protein P-II	81	172	IPR002187	GO:0006808\|GO:0030234
	Cca03g02742	189	SUPERFAMILY	GlnB-like	73	175	IPR011322	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca03g02742	Cca-Chr3	48769564	48773497	Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca03g02742	-		-	gmx:100499915	301.597

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca03g02742	03	48769564	48773497	Cca03g02742	03	48769564	48773497	ECH