Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02737 ATGAAATGGAAGCAGAAGAGGATGTCGAAACAAAGGTTGCAGGGTAAGGTGGCGATTGTGACGGGTGGAGCCACCGGAATAGGCGCAGAAGCCGTAAAGATATTCGTGGAAAACGGTGCATCCGTGGTCATAGCAGACATCAAAGACGAATTGGGTCACAAGTTGGCTACTTCAATTGGGTTGGAGACGGTTAGTTACCATCACTGTGATGTGAGAGACGAGAAACAAGTTGAGGAAACAGTGGCTTTCGCGGTAGAGAAGTATGGCAGCATCGACATATTGCTGAGCAATGCTGGGATCCCAGGGCCTTTATCAAGCATCCTAGAGTTCGATCTGAAGGAATTTGACAACACGGTGGCAGTGCATGTACGAGGAGCAGCAGCAACAATAAAGCACGCGGCACGTGTGATGGTGGCGAGGAAGACACGTGGGTCGATAATTTGCACGGCTAGCGTGGCTGGGTCGTTCGGGGGATGCGCGGGACATGATTACACGGCATCCAAACACGGCCTTGTAGGGCTTGTTCGTTCGACGTGTAGCGAGCTTGGAGCATATGGGATAAGAGTGAATTCCATCTCGCCTTTTGCAGTGGCGACGCCTCTTACCTGTGGCACCTTCGATATGGAGCCTGCTGAAGTTGAAGCTGCGGGGCATGCTCTTGCCAATCTTCATGGGATTACGCTCAAGGCTACTCATATTGCCCAAGCTGCTCTCTTTCTCGCCTCTGATGATTCCGCTTATATCAGTGGACACAACATGCTCGTCGATGGAGGCTTCTCCGTCGTTAATCGTGGTCTTCCTAGTATAATTCAAAATTAA 819 0.5067 MKWKQKRMSKQRLQGKVAIVTGGATGIGAEAVKIFVENGASVVIADIKDELGHKLATSIGLETVSYHHCDVRDEKQVEETVAFAVEKYGSIDILLSNAGIPGPLSSILEFDLKEFDNTVAVHVRGAAATIKHAARVMVARKTRGSIICTASVAGSFGGCAGHDYTASKHGLVGLVRSTCSELGAYGIRVNSISPFAVATPLTCGTFDMEPAEVEAAGHALANLHGITLKATHIAQAALFLASDDSAYISGHNMLVDGGFSVVNRGLPSIIQN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02737 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 IPR002347 -
Cca03g02737 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 IPR002347 -
Cca03g02737 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 IPR002347 -
Cca03g02737 272 Pfam Enoyl-(Acyl carrier protein) reductase 22 260 - -
Cca03g02737 272 PRINTS Glucose/ribitol dehydrogenase family signature 17 34 IPR002347 -
Cca03g02737 272 PRINTS Glucose/ribitol dehydrogenase family signature 89 100 IPR002347 -
Cca03g02737 272 PRINTS Glucose/ribitol dehydrogenase family signature 138 154 IPR002347 -
Cca03g02737 272 PRINTS Glucose/ribitol dehydrogenase family signature 164 183 IPR002347 -
Cca03g02737 272 PRINTS Glucose/ribitol dehydrogenase family signature 185 202 IPR002347 -
Cca03g02737 272 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
Cca03g02737 272 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 8 271 - -
Cca03g02737 272 Gene3D - 2 266 - -
Cca03g02737 272 PANTHER OXIDOREDUCTASE-RELATED 8 271 - -
Cca03g02737 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 261 IPR036291 -
Cca03g02737 272 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 151 179 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02737 Cca-Chr3 48718120 48719083 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02737 13 258 Acyl Lipid Metabolism Gene Families AT3G55290 30.385 1.06e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02737 - - gmx:100798299 447.203