Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02735 ATGTCGAAACAAAGGTTGGTTGGTAAGGTGGCTCTTATCACCGGTGGAGCAAGTGGGATTGGTGAAGAGACAGTGAGATTGTTCGCTGAACATGGAGCCCTTGTTGTTGCAGCAGATATTCAAGATGAACAAGGTCAGCAAGTTGCTGCTTCAGTAGGGTCAGATAAAGTAACATACCACCACTGCGATGTGAGAGACGAAAACCAAGTCAAAGAAACCGTGAAATTCACTTTGGAAAAGCATGGTCGCATAGATATCCTGTTCAGCAACGCTGGAATATTAGGTCCTTTATCTTGCATCCTTGACCTTGATCTGAATGAGTTTGACAACACCATGGCCACAAACGTTCGCGGTGTAGCCGCCACAATCAAGTACTCGGCACGTGCCATGGTTGCCAAAAGAATCCGCGGATCCATCATATGCACCACCAGTGTGGCTGCTACGGCTGCTGGAACGGGTCCTCATGGTTACACAACATCGAAACATGCTCTTTTGGGGTTGGTGAAATCAGCTAGTAGTGAACTTGGAGCTTATGGAATAAGGGTTAATAGCATATCTCCTTTTGGAGTTGCCACACCCCTTTCATGCAAAGCTTTCAACTTTGAACCTCAAGAAGTTGAAGATCAGAGCTGCTCACATGCTAATCTGAAGGGTGTTGTGTTGAAGGCTCGGCATATAGCAGAAGCAGCTTTGTTTCTGGCTTCTGATGAAGCTTCTTACATCAGTGGCCACAATTTGGCGGTGGATGGTGGTTTTAGCGTGGTTATTCGTAGTTATCCTTTTACACCTGTAGACCCAGATAGTTTAAATTTTTGA 816 0.4559 MSKQRLVGKVALITGGASGIGEETVRLFAEHGALVVAADIQDEQGQQVAASVGSDKVTYHHCDVRDENQVKETVKFTLEKHGRIDILFSNAGILGPLSCILDLDLNEFDNTMATNVRGVAATIKYSARAMVAKRIRGSIICTTSVAATAAGTGPHGYTTSKHALLGLVKSASSELGAYGIRVNSISPFGVATPLSCKAFNFEPQEVEDQSCSHANLKGVVLKARHIAEAALFLASDEASYISGHNLAVDGGFSVVIRSYPFTPVDPDSLNF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02735 271 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 1 259 - -
Cca03g02735 271 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 259 - -
Cca03g02735 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Cca03g02735 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Cca03g02735 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Cca03g02735 271 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
Cca03g02735 271 Gene3D - 1 259 - -
Cca03g02735 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 255 IPR036291 -
Cca03g02735 271 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Cca03g02735 271 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Cca03g02735 271 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Cca03g02735 271 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Cca03g02735 271 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Cca03g02735 271 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02735 Cca-Chr3 48702106 48703545 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02735 2 263 Miscellaneous Gene Families AT2G29150 32.714 5.78e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02735 - - gmx:100811279 447.588