Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02732 ATGGATTCGGCGAATGGAACAACGGTGGTGGAGGATCAACGGTTAACTGAATGGCGCATGCATCGTGGCCCCTACCTCGGTGACATCTCAGCTCTCTGTTTTCTTCACTTGCCCAATCTCCCTCTTCCTCTTCTGCTCGCCGGTTTGGGTTCGGAGATTACGGTGTACAATTTAGAATTGAGTAACAGAATAAGATCCTTCTCTGTATTCGAAGGAGTTCGCGTCCATGGAATTGCTTCTAGTTTCCCTCAAGACACCGTGGTTGCTGTGTTTGGGGAGACGAGAGTGAAACTGCTTAGCTTCGCATTTGATAGCGTTTCCGCGAGCGCTGAGTTGACGCTCATTCATTTGTTGCCCAAGTTTGGTCACTGGGTTTTGGATGTTTGCTTCCTCAAGGGATGCTTACCTCGTTCCAATGTGGAGAGTCATTTTCTTGCTGTAGGATGTAGCGACAATTCAGTTCACATTTGGGATATTCCTAACTCTAATTTGGTTTTTAAGGTTCAATCTCCAGTTCGGTGCCTTCTATACTCAATGCGATTGTGGGGTCACAATCTTGAAGCTCTCCAAATTGCGTCTGGTACAATATTTAATGAGATTATTGTTTGGAAAGTGGCCCCACAACACAATAAATCTTCAAGTCATCAAGAAAACTGTGATCATCGGAGTATTTCATCCTCCAATTGCTGCCAGCTAAAGGATCAACTCTATGAGGCTATTCATGTATGTAAACTTATTGGACATGAAGGTTCGATCATCCGAATAGTATGGTCATCTTGTGGATCTAAACTGGTATCTGTCTCTGATGACCGGAGTGCACGGATCTGGGCTGTTCCTATTGAATGGGAACAATCGTTGAGACATGATCCCGTTGCCCTTGTCTTATTTGGTCATAATGCTCGGGTTTGGGACTGCTGTATTTCTGATAATTTGATTGTCACTGTCAGTGAGGATTGTACATGTCGGATATGGGGAGTTGATGGTAAACAACTGCAAGTCATTAAGGAGCACATTGGAAGGGGTATATGGCGATGTTTGTACGACCCAAATTCATCACTTCTTATAACGGCTGGGTTTGATTCTGCTATTAAAGTACATCGACCTCATACTTCTCTGTCCATGGGCTTGGAAGAAGAACAAGAGTCCCCAGGTAGGACAGAGATGTTTTCCATCTGCATCCCTAACATGTTGGAGCATATTGGATTTATGGACAGCAAGAGTGAATATGTTCGATGTATGCGCTTTTCTTGTCAGGATTCTCTTTATGTTGCTACAAATAATGGTTATCTCTACCATGCCAAATTATGTGATACTGGAGGTGCTCAGTGGAATCAACTTGTCCAGGTCAGCAATGGGGCGCCAATTATCTGTATGGATTTATTGGCCAAGGGCTCTTTTGATCTTGATGGTGGTAATGAGGATTGGATTGCTATTGGAGATGGTAAAGGAAATATGACAATTGTTGCAGTTGCAGTTACTAACAATGATTGCACTCCAACAGTGAGATTGTGTTTTTCTTGGCCAGCTGAAATGGAGAGACAGCTCTTGGGTACTTATTGGTGTAAATCTCTGGGATATAGGTATGTCTTCACAGCTGATCCTAGAGGAACATTGAAACTATGGAGGTTGCCTGACCCTTCACAATTTGATCTTCAGAGCTCCACGAGGAGTAACAATGTATTGCGTATAGCCGAGTTCATATCAAACTATGGAATACGGATAATGTGTTTGGATGCATGCATGGAGGAAGAGGTTCTAGCATGTGGAGATGTACGTGGTAATATGGTTTTGTTCCCTTTGCTAAAGAATCTGTTGCTGGGCATATCTGCTGCACAAGAAACGAAGATACCTCCTGTAAATCATTTCAAAGGGGTTCATGGGATTTCAAGTGTCTCCAGTGTTTCTGTGACTAAGCTTGGTTATAATCAGATTGAGATATGCTCAaCTGGGGCAGATGGTTGTATATGCTATCTGGAATATGATAAAGAAATGCTGAATTTGCAATTTACGGGGATGAAACAAGTGAAAGAATTGTCTTTGATTGAGTATGTTTCTGTGGATAACAACGGTGATAGATTGTCAAGCAGCTATGCAGCTGGTTTTGCATCAGTGGACTTCATAATATGGAACTTAGTTAATGAGAATAAGGTGGTGAACATTCCATGTGGTGGATGGCGGCGTCCTCATTCCTATCATCTAGGTGATATACCAGAGATGAAGAACTGCTTTGCCTTTGTCAAGGATGAAATGATACATATACATAGACAATGGATTCATAATAGAGATGGGAAGATATACCCTCAAAGTTTGCACATGCAGTTCCATGGTAGAGAGATACATTCCTTGTGCTTTATCTCTGATGATGTGCGTGTTAGAGAAAATAACAATTGCACCTTATTTTCCAAATTAAGTTGGATTGCAACTGGATGTGAAGATGGAACTGTGAGGTTGACCCGGTACTCTCCAGGTACTGAAAATTGGTCTATGTCAAAACTGCTTGGTGAACATGTTGGAGGATCGGCTGTAAGATCAATTTGTTGTGTGTCAAAAGTACACACCATTTCATCAGATACGATTGATGTACCTGATGGGAGGATTGAACTGAATTCTGCTGTTGAGAACAATGATAATCCAACATTACTGATATCAGTGGGTGCAAAGCGTGTCTTAACTTCTTGGATATTAAAAAATAGGAGGCTGGACAACAAAAATGACTCCCTAACCGATTATCAGTATAATTCAGAAGGAGTTGATGATTGTTTTTTGTCAGGGTTGTCCTCATCAATGACGTTCCAGTGGCTTTCCACCGATATGCCAGCCAAATATTCAATTACACATGATGCTACTAAAAAAAATGTGGAGAAAATAGTTGGTGTTGCTAAAAATGTGTCTAATACAAATAATGATGCTAAAATGGGATCACTGATTTCTGAAAGTGGAATGACAGACTTGATCAGAGATAAACATGATGATGACTGGAGATATCTTGCAGTCACTGCTTTTCTTGTTAAATGTTCTGGTTCCAGGATATCTGTCTGCTTTGTTGTTGTTGCATGTTCAGATGCTACACTTATGTTACGGGCTTTAATTTTGCCTTTTCGCTTGTGGTTTGACGTTGCTTTACTGGTTCCTTTATTGGCACCTGTTTTGACATTGCAGCATATCATCTTTCCCATGTGTAAGCCTTATAAAGAAAACATCCCAGTTGGAAATGTTTATATTGTGATTAGTGGATCTACTGATGGAAGTATTACTTTTTGGGACCTAACTGACAGTGTTGAAGCTTTTATGCAGCGGGTTTCAGTTTGTAATGATGAAAAAAAATTTGATTGTCAAAAACGACCACGCACAGGGAGAGGTAGTCAGGGTGGCAGAAAGTGGAGATCTTTAAGGAATGACTTGTCAAAGAAAAGACAAGACAGCAGTCTGGTCACTTCGCAAGCCAAAGACAAGACCAAAAGCATCAGCTATGCTCCACACGGGAACTCTAACATGCCAAATGATTCTGAAGACAGCAAGATGGTTTGTTCTCAATCTACACACACAGGTCCCCCGGAGTTACAAAGCACCCCGGAGTTACGAAGCAAGACTGATAATTCGTCAGTGGAAATATGTGAAATACAGCCTCTATGCCTTTTGCAAAATATTCACCAATCTGGTGTCAACTGTCTCCATGTTTCAGAGATAAAGGCTGGGCAAAATACTGGCAGTTGTCATGTGTACAGCATAGTTAGTGGGGGTGATGATCAAGCACTTCATCATCTCATGGTGGAATTATCACCTAAATCGATAAATTTAAATGATGGGATTTTGAACCCAGACATCACACATTTGGTTTCTGTACCTGAATATGGAAAGGACGTCAATTTTCAAAGTCAGAGCAAGAGTTATAAGATTAAATTCTTAAATTACGAAAATTTTCCCTCTGCCCACAGCTCTTCTGTCAAAGGTGTCTGGACAGACGGAACTTGGGTGTTTTCAACTGGACTTGATCAGCGGGTCAGGTGCTGGCATCTTCAGCAGAGCAAACTAATTGAGCATTCATATCTAATAGTTAGTGTGCCAGAGCCAGAAGCATTATCTGCCAGGGCTTGTGGCAGGAATCATTATCAGATTGCTGTTGCTGGAAGAGGGATGCAAATAATCGAATTTTCTGAATTTTGA 4164 0.4135 MDSANGTTVVEDQRLTEWRMHRGPYLGDISALCFLHLPNLPLPLLLAGLGSEITVYNLELSNRIRSFSVFEGVRVHGIASSFPQDTVVAVFGETRVKLLSFAFDSVSASAELTLIHLLPKFGHWVLDVCFLKGCLPRSNVESHFLAVGCSDNSVHIWDIPNSNLVFKVQSPVRCLLYSMRLWGHNLEALQIASGTIFNEIIVWKVAPQHNKSSSHQENCDHRSISSSNCCQLKDQLYEAIHVCKLIGHEGSIIRIVWSSCGSKLVSVSDDRSARIWAVPIEWEQSLRHDPVALVLFGHNARVWDCCISDNLIVTVSEDCTCRIWGVDGKQLQVIKEHIGRGIWRCLYDPNSSLLITAGFDSAIKVHRPHTSLSMGLEEEQESPGRTEMFSICIPNMLEHIGFMDSKSEYVRCMRFSCQDSLYVATNNGYLYHAKLCDTGGAQWNQLVQVSNGAPIICMDLLAKGSFDLDGGNEDWIAIGDGKGNMTIVAVAVTNNDCTPTVRLCFSWPAEMERQLLGTYWCKSLGYRYVFTADPRGTLKLWRLPDPSQFDLQSSTRSNNVLRIAEFISNYGIRIMCLDACMEEEVLACGDVRGNMVLFPLLKNLLLGISAAQETKIPPVNHFKGVHGISSVSSVSVTKLGYNQIEICSTGADGCICYLEYDKEMLNLQFTGMKQVKELSLIEYVSVDNNGDRLSSSYAAGFASVDFIIWNLVNENKVVNIPCGGWRRPHSYHLGDIPEMKNCFAFVKDEMIHIHRQWIHNRDGKIYPQSLHMQFHGREIHSLCFISDDVRVRENNNCTLFSKLSWIATGCEDGTVRLTRYSPGTENWSMSKLLGEHVGGSAVRSICCVSKVHTISSDTIDVPDGRIELNSAVENNDNPTLLISVGAKRVLTSWILKNRRLDNKNDSLTDYQYNSEGVDDCFLSGLSSSMTFQWLSTDMPAKYSITHDATKKNVEKIVGVAKNVSNTNNDAKMGSLISESGMTDLIRDKHDDDWRYLAVTAFLVKCSGSRISVCFVVVACSDATLMLRALILPFRLWFDVALLVPLLAPVLTLQHIIFPMCKPYKENIPVGNVYIVISGSTDGSITFWDLTDSVEAFMQRVSVCNDEKKFDCQKRPRTGRGSQGGRKWRSLRNDLSKKRQDSSLVTSQAKDKTKSISYAPHGNSNMPNDSEDSKMVCSQSTHTGPPELQSTPELRSKTDNSSVEICEIQPLCLLQNIHQSGVNCLHVSEIKAGQNTGSCHVYSIVSGGDDQALHHLMVELSPKSINLNDGILNPDITHLVSVPEYGKDVNFQSQSKSYKIKFLNYENFPSAHSSSVKGVWTDGTWVFSTGLDQRVRCWHLQQSKLIEHSYLIVSVPEPEALSARACGRNHYQIAVAGRGMQIIEFSEF 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02732 1387 SUPERFAMILY WD40 repeat-like 13 205 IPR036322 GO:0005515
Cca03g02732 1387 SUPERFAMILY WD40 repeat-like 526 849 IPR036322 GO:0005515
Cca03g02732 1387 MobiDBLite consensus disorder prediction 1139 1195 - -
Cca03g02732 1387 SUPERFAMILY WD40 repeat-like 143 562 IPR036322 GO:0005515
Cca03g02732 1387 Pfam WD domain, G-beta repeat 122 158 IPR001680 GO:0005515
Cca03g02732 1387 Pfam WD domain, G-beta repeat 244 276 IPR001680 GO:0005515
Cca03g02732 1387 Gene3D - 241 603 IPR015943 GO:0005515
Cca03g02732 1387 PANTHER WD REPEAT PROTEIN 20 1385 - -
Cca03g02732 1387 Gene3D - 606 916 IPR015943 GO:0005515
Cca03g02732 1387 Gene3D - 1065 1354 IPR015943 GO:0005515
Cca03g02732 1387 Gene3D - 3 239 IPR015943 GO:0005515
Cca03g02732 1387 ProSiteProfiles Trp-Asp (WD) repeats profile. 1075 1097 IPR001680 GO:0005515
Cca03g02732 1387 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 276 - -
Cca03g02732 1387 SMART WD40_4 288 325 IPR001680 GO:0005515
Cca03g02732 1387 SMART WD40_4 238 277 IPR001680 GO:0005515
Cca03g02732 1387 SMART WD40_4 615 659 IPR001680 GO:0005515
Cca03g02732 1387 SMART WD40_4 1295 1338 IPR001680 GO:0005515
Cca03g02732 1387 SMART WD40_4 111 158 IPR001680 GO:0005515
Cca03g02732 1387 SMART WD40_4 766 819 IPR001680 GO:0005515
Cca03g02732 1387 SMART WD40_4 500 542 IPR001680 GO:0005515
Cca03g02732 1387 SMART WD40_4 327 367 IPR001680 GO:0005515
Cca03g02732 1387 SUPERFAMILY WD40 repeat-like 1074 1345 IPR036322 GO:0005515
Cca03g02732 1387 MobiDBLite consensus disorder prediction 1111 1195 - -
Cca03g02732 1387 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 276 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02732 K24737 - gmx:100780968 2397.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02732 03 48671468 48682706 Cca03g02732 03 48671468 48682706 ECH