Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02730 ATGTGCATTCCATCTTATGTGTTCCAATCTCTACATTCCCCATTCTATTTTTCAGATCACCATAGTCGGTTAGTTATGGCAGTCGCCATGGCAATAATGACCAGGCAGCATCTGCTGACTTACATCTACCTTCTAGTTTACATTTCACTATCATCAGGGGTTATTCTGTACAACAAGTGGGTCCTTTCCACATTGTATTTTAATTTCCCATTTCCAATAACACTCACCATGATCCATATGGCTTTTTCTGGTGGGGTGGCCTTTTTGCTTATCCGTGTTCTGAAGGTTGTATCACCAATTAAAATGACATTTCATATATATGCAACTTGTGTGGTCCCTATAAGTGCTTTCTTTGCAGCTAGTCTGTGGTTTGGGAATACTGCTTATTTGTACATATCTGTGGCCTTCATCCAGATGCTTAAAGCCTTGATGCCAGTGGCAACATTTCTTGTGGCTGTTACTTGTGGAACTGAGAAATTAAGATGTGATGTATTCTGGAACATGGTGCTGGTCAGTGTTGGAGTTGTCATTTCCTCCTATGGGGAAATTCATTTTAATGTGCTCGGTACAGTTTATCAGGTCACTGGAATAGTTGCTGAAGCATTGAGGCTGGTTTTAACTCAAGTTCTTCTTCAAAAGAAGGGCTTGACACTAAACCCTATTACCAGCTTGTATTACATAGCACCCTGCAGCTTTGTATTTCTTTTTATCCCATGGTATATCCTTGAGAAGCCTGAGATGGAAGATCCACATATGCAGTTTAACTTCTGGATATTTTTCTCAAATGCTCTTTGTGCTTTGGCATTGAATCTTTCCACATTCTTAGTGATTGGTAGAACTGGGGCAGTAACTATTCGGGTGGCTGGAGTTTTGAAAGACTGGATACTTATCACTCTTTCAACTGTCTTGTTTCCTGAATCAAATATTACTGGGCTTAATATTATTGGCTACGCTATTGCTTTAAGTGGTGTTGTTATTTACAACTACCTTAAGGTCAGGGATGTTCGAACATCTCAACTTCAAAGCGTCCAAGATGAATCATCAGGAAAGGAGCTGCAGACAGAGAGAAAAGTAGATGATGACATGGACAAAAAAGAGGAGACTTTATGGAATGATTCAATTTCTGATACTCATATAGATGAAGAAGCACCTTTAATCACTTCATCGCGGATATCTCATTTTGGAGTTGGAAGAAAACCATCTTAG 1206 0.3947 MCIPSYVFQSLHSPFYFSDHHSRLVMAVAMAIMTRQHLLTYIYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGGVAFLLIRVLKVVSPIKMTFHIYATCVVPISAFFAASLWFGNTAYLYISVAFIQMLKALMPVATFLVAVTCGTEKLRCDVFWNMVLVSVGVVISSYGEIHFNVLGTVYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEMEDPHMQFNFWIFFSNALCALALNLSTFLVIGRTGAVTIRVAGVLKDWILITLSTVLFPESNITGLNIIGYAIALSGVVIYNYLKVRDVRTSQLQSVQDESSGKELQTERKVDDDMDKKEETLWNDSISDTHIDEEAPLITSSRISHFGVGRKPS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02730 401 PANTHER SOLUTE CARRIER FAMILY 35 21 380 - -
Cca03g02730 401 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 21 380 - -
Cca03g02730 401 MobiDBLite consensus disorder prediction 343 364 - -
Cca03g02730 401 MobiDBLite consensus disorder prediction 349 364 - -
Cca03g02730 401 Pfam Triose-phosphate Transporter family 42 328 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02730 Cca-Chr3 48637498 48644261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02730 30 395 Organic Solute Cotransporters AT3G17430 76.203 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02730 - - gmx:100779373 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02730 03 48637498 48644261 Cca03g02730 03 48637498 48644261 ECH