Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca03g02727 | ATGGATGCCCATGAAGCCAGAATCTTGCTCGGTTTTCCTCCCAATTCACGTCCAACTCCTTCCCAGGTAAAATCAGCTTACAAAAAGAAGGTGTGGGAATCTCACCCTGACCTATTTCCGTCTCATGAAAAGCCTCTTGCTGAGTCTAAGTTTAAACTGATTTCTGAAGCTTACACATGCCTGCAATCTGGTGGGAGAGAAACTTCAAGTTCAGTTGAATATTCACATGTTGTGAGAACTGGATTTCCAAGGGCTCATGGAGGAAGAAAAAATCATACTATGATTAAAGTTCCATTCATGTTAATCATTCTGGGAACTGTTGCGCTTGGAGGACTTAATGCTTCAAGGGCTTACAAAAAACAAAAGGCTGATAACCCTTCACATAATCCATTTCTTCCTTGA | 402 | 0.4129 | MDAHEARILLGFPPNSRPTPSQVKSAYKKKVWESHPDLFPSHEKPLAESKFKLISEAYTCLQSGGRETSSSVEYSHVVRTGFPRAHGGRKNHTMIKVPFMLIILGTVALGGLNASRAYKKQKADNPSHNPFLP | 133 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca03g02727 | 133 | PANTHER | OS07G0637100 PROTEIN | 1 | 133 | - | - | |
| Cca03g02727 | 133 | SUPERFAMILY | Chaperone J-domain | 9 | 65 | IPR036869 | - | |
| Cca03g02727 | 133 | ProSiteProfiles | dnaJ domain profile. | 5 | 78 | IPR001623 | - | |
| Cca03g02727 | 133 | PANTHER | - | 1 | 133 | - | - | |
| Cca03g02727 | 133 | CDD | DnaJ | 9 | 58 | IPR001623 | - | |
| Cca03g02727 | 133 | Pfam | DnaJ domain | 10 | 62 | IPR001623 | - | |
| Cca03g02727 | 133 | Gene3D | DnaJ domain | 7 | 86 | IPR036869 | - | |
| Cca03g02727 | 133 | SMART | dnaj_3 | 4 | 66 | IPR001623 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca03g02727 | - | - | gmx:100527460 | 242.276 |