Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02726 ATGGACCTTATTAATGAATTGAGGGCCAAACAGAAGGAAATTGATGGTTTGAAGTCTCTAATGACCGAATGTTCTGAGGATAGGGACATGCTTAGTATGGCTACAGAGGAAATGGGCCAGGCCATAGAGGAAGAAAGAAGACTGCAAAATTTGCTGCTGAAGTCCTTACTTCCTAGGGACGATGCTGATGAAAGGGATTGCATTTTGGAGGTGCGAGCAGGCACTGGTGGAGAGGAAGCTTCCTTGTTTGCAATGGATATCTTTAGAATGTATGAGAAGTATGCTCTCAAGAAAGGCTGGAAGTTTGACGTAGTAGATATATCTCAATCTAGTTTTAAAGGATACAAGGAGGCTAGTGCAGCGATTGCAGGAGTCGGTGCTTTTGGGAAACTAAAATTTGAGAGTGGGATTCATAGAGTCCAGCGAGTTCCTGTGACAGAAAAGTTGGGACGTATTCATACCAGTGCTGTTTCTGTTGCAATCCTTCCTCAGGCTGATGAGGTGGATGTTCAATTGAAGAATGAAGACTTAAGAATCGATACCTATAGATCTGGGGGTGCAGGTGGTCAGCATGCAAATACAACCAACAGTGCTGTTAGAGTGACTCACATTCCAACAGGGATTACGATTGCTATACAAGATGAGCGCTCTCAAATATATAACAAGGCCAAAGCTCTTAAATTACTGTGTGCAAAACTATATGAAATGGAAAGGCTCAGACTTCATAATAGTCAATCAAAGCTTCGATCAGAGCAGATTGGTAGTGGGGATAGATCTGAACGCATCAGAACATACAATTTTCCTCAGGGTCGTGTAACTGATCATAGAGTTGGTATCACTTATCACTCTGTAGAGGATGTGATGCAAGGTGAAAATCTTGATGTCTTCATTGATGCTCTTCTATTGCAAGAAGAACTGGATGCAATTGCGGCTTTTAGTTCTTCCCAGTAA 951 0.4217 MDLINELRAKQKEIDGLKSLMTECSEDRDMLSMATEEMGQAIEEERRLQNLLLKSLLPRDDADERDCILEVRAGTGGEEASLFAMDIFRMYEKYALKKGWKFDVVDISQSSFKGYKEASAAIAGVGAFGKLKFESGIHRVQRVPVTEKLGRIHTSAVSVAILPQADEVDVQLKNEDLRIDTYRSGGAGGQHANTTNSAVRVTHIPTGITIAIQDERSQIYNKAKALKLLCAKLYEMERLRLHNSQSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSVEDVMQGENLDVFIDALLLQEELDAIAAFSSSQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02726 316 PANTHER LD18447P 1 314 - -
Cca03g02726 316 Gene3D - 69 297 - -
Cca03g02726 316 SUPERFAMILY Release factor 4 304 IPR045853 -
Cca03g02726 316 SMART PCRF_a_2 19 134 IPR005139 GO:0006415
Cca03g02726 316 PANTHER LD18447P 1 314 - -
Cca03g02726 316 Gene3D - 165 260 - -
Cca03g02726 316 Pfam RF-1 domain 166 276 IPR000352 GO:0003747|GO:0006415
Cca03g02726 316 Pfam PCRF domain 3 159 IPR005139 GO:0006415
Cca03g02726 316 Gene3D - 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02726 Cca-Chr3 48600723 48606910 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02726 K02835 - gmx:100800412 551.592