Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02711 ATGAAAATGGATTCAGCGAGTGTTAGGGAATTCATAGCAAAGGAATTTGGTGATTGGGACGACGATGTGATTTACGTTGCTCGATTCAAAGCCTTTTCCGGTCAAAGATGCGATTGGGAACCGACTTTCCTCTTCTGGAAACACTTGATCATCAAAATCGCCACCCATTTTCGCATCCTCCTCATTACACCCTCCCAGGTCAAGAATGAATGGTTCAATCGAGGAGGGTTAACCCCTTTGTGTCTTGACGATGTACTGTCTCTAATGTATGATGAAGGTGACATCACCAGAACTTTGGATCTTGCTGATCCAACGCGTGGACGATTCTCCCAACTAGTACGGACACTCACTAACTTGATAACAAGGCCACCAACTCCAGATATTATGGCTGAGCAATGCGTTATCGTAATCACCATGCTTAAGGATAAGGCTGCTGAAGTTGTCAAACATCTATCTGAAAGTCACTGGAATTCATCTTGTGTTGTCACAATGAAGAAGTTTCAGGATATATGTGGAGGGCCGGATGAAGCATCTGTAATATTGAGGTATCTGTCTGGGTCTAGAACAGCACAGTATCTGTCAGTGAATGAGAAAGAATTTGTACAGGGGGTAAAGGTTTCTCTCTCTGTAGGAGCATTATGTAGTATCTCTAATTTAGATTATGATGTACTGCACTTGATTTGGACAACTGAGAAGCTTCAGCAACAACTCGATGTGACTGACAGGCGTTATGAATTGTTGAGAAAATCAGCATTGGCTTCTCTACATTCTGGGAACAAAAAATTGGCCCGTAACTATGCAAGGGAGATGTTATTAGCCACCAAGAGTAGAGAAAAATGTTCATCACTTTTGAGCAGAGTAGAGGAAGTACTTGGCATTATTGCCGACGCTGAGTCAACAAAAAAGGTTGCTGAAGCTATGCAGATTGGAGCTCGGGCTATTAAAGAAAATAAGATCAGCGTGGAAGATGTTTATCTTTGTTTAAGAGATATTCAAGAGAGCATCGATTCACACAAGGAAGTTGAAAACACACTAGAACAAACACCATCATACGTGGATATCGACGATGAAGATATTGAAGAGGAATTTGAGAAGTTGGAGCTGGGTGTTGAGAAAGAGGCACAAGTTCCTGCAGCGGAGAAGACGACTAGTGCAGAATTTATTAGTGATGCTTTCTCAAATCTCAAGCTTTCAGACCGTCCAGCTGTGGAGCCAGGAGTCACTCAGGTGGTGTCAGAGGGAGGCAAATTAACAAAAAAATTAGAAATGGAAGCTGTGTAA 1281 0.4223 MKMDSASVREFIAKEFGDWDDDVIYVARFKAFSGQRCDWEPTFLFWKHLIIKIATHFRILLITPSQVKNEWFNRGGLTPLCLDDVLSLMYDEGDITRTLDLADPTRGRFSQLVRTLTNLITRPPTPDIMAEQCVIVITMLKDKAAEVVKHLSESHWNSSCVVTMKKFQDICGGPDEASVILRYLSGSRTAQYLSVNEKEFVQGVKVSLSVGALCSISNLDYDVLHLIWTTEKLQQQLDVTDRRYELLRKSALASLHSGNKKLARNYAREMLLATKSREKCSSLLSRVEEVLGIIADAESTKKVAEAMQIGARAIKENKISVEDVYLCLRDIQESIDSHKEVENTLEQTPSYVDIDDEDIEEEFEKLELGVEKEAQVPAAEKTTSAEFISDAFSNLKLSDRPAVEPGVTQVVSEGGKLTKKLEMEAV 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02711 426 PANTHER SNF7 FAMILY PROTEIN 105 398 - -
Cca03g02711 426 Pfam Snf7 229 375 IPR005024 GO:0007034
Cca03g02711 426 Gene3D - 226 383 - -
Cca03g02711 426 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 105 398 IPR005024 GO:0007034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02711 K15053 - gmx:100783674 679.863