Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02703 ATGTTCTCAGCACCAAGAGATATGGGTTGGAATGGATGTCTCAAGAACCTGGTCATCATGACTTCTTTGATGGTGGCCATGATTGTTGTTCAACATGTGGAGTGTGAGGAAGGTGATCATGTTCATGAGTCAGCCAGCATGTTAGTTCAGCATGGTGGCTTCGTTCAACGAAGTGGCACCAATTTCGTTCTGAATAACAAGCGTTTCTACTTCAACGGATTCAACGCCTACTGGTTAATGGTTATGGCTTCTGACCCATCCACAAGGCCCAAGGTCACTACCATTTTGCAACAAGCTTCAAGCCATGGTTTAACTGTTGCAAGAACTTGGGCTTTCAATGATGCAGGTTACAGAGCCCTTCAGGTCTCTCCCGGTTCCTACGACGAGCAAGTATTCAGGGGATTAGACTTTGTAGTATCAGAAGCGGGAAAACATGGGGTGCGTTTGATACTGAGTTTGGTCAACAACTGGAAAGATTTTGGTGGGAAAAATCAGTACGTGGAATGGGTAAAGCAACATGGTGCGTACGTGAACAACGAAGACGATTTCTTTACGCATCCTGTTGTTAAGACACTTTACAAAAACCATATTCAGACTGTGCTGACAAGAAAAAACACCATAACTGGGGTGGCATATAAGGACGATCCTGCCATATTTGCTTGGGAACTTATGAATGAACCTCGTTCCCAACACGACAACTCCGGAAAAGCTATTCAGGAATGGGTGACTGAGATGGCTGCCCATGTCAAATCCATCGATAGGAACCATTTGCTGGAAATAGGACTAGAAGGGTTCTACGGTGAAACAGTGCCGGAAAAAAAACAATTCAATCCTGGTTACCAACTTATTGGTACCGATTTCATTTCAAACAACCTAGTTCACCAAGTCGATTTTGCTACCATACATCTCTACCCTGAACAGTGGTTGCCAGGCTCAAACGAAGCTGCTCAGGTTGCATTTGTTGACAAATGGGTAGAATCACATATTCATGACGCCAAAAATGTTCTTGGAAAACCTATTGTTGTTGGTGAATTTGGCAAGTCTTCGAAGTTATCAAGCATGGTTGAAAGGGACAGTTACATGAATAAAATGTATAGTGCAATATACAATAGTGCTAGTAGTGGGGGACCCTGTGCGGGTGGGCTATTTTGGCAGCTCATGGCTCAAGGAATGGATAGTTTCCGTGATGGTTATGAAGTTATCTTTGAAGAGAGTCCTTCAACTACCAGAATTATAGAACAGCAATCCCACAAAATGTCTAGTATTGCTTAG 1272 0.4332 MFSAPRDMGWNGCLKNLVIMTSLMVAMIVVQHVECEEGDHVHESASMLVQHGGFVQRSGTNFVLNNKRFYFNGFNAYWLMVMASDPSTRPKVTTILQQASSHGLTVARTWAFNDAGYRALQVSPGSYDEQVFRGLDFVVSEAGKHGVRLILSLVNNWKDFGGKNQYVEWVKQHGAYVNNEDDFFTHPVVKTLYKNHIQTVLTRKNTITGVAYKDDPAIFAWELMNEPRSQHDNSGKAIQEWVTEMAAHVKSIDRNHLLEIGLEGFYGETVPEKKQFNPGYQLIGTDFISNNLVHQVDFATIHLYPEQWLPGSNEAAQVAFVDKWVESHIHDAKNVLGKPIVVGEFGKSSKLSSMVERDSYMNKMYSAIYNSASSGGPCAGGLFWQLMAQGMDSFRDGYEVIFEESPSTTRIIEQQSHKMSSIA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02703 423 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 21 422 - -
Cca03g02703 423 Pfam Cellulase (glycosyl hydrolase family 5) 70 368 IPR001547 GO:0004553|GO:0071704
Cca03g02703 423 SUPERFAMILY (Trans)glycosidases 54 412 IPR017853 -
Cca03g02703 423 Gene3D Glycosidases 50 423 - -
Cca03g02703 423 PANTHER - 21 422 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02703 Cca-Chr3 48343341 48347227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02703 20 422 Glycoside Hydrolase AT5G66460 54.815 9.69e-161 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02703 K19355 - gmx:100787923 739.184