Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02701 ATGTCGATGATACCGAAGGAGCCGGAGCAGGTGATGAAGATGAGAGGCGGTTGTGTGTTGGGGAAGAAAACCATTCTCAAGAGCGACCATTTCCCTGGTTGCCAGAACAAGCGTCTCTCTCCTCAGATCGAAGGCGCTCCCAATTATCGCCAGGCATCCGACTCCTTGCATGTTCACGGCGTTGCCATTCCCACGATTCATGGAATCCGGAACGTTCTCAACCACATTGGCGCTCGATTCAAAGTTCTCTGGATTAGCCTTCGCGAGGAGCCCCTTGCGTACATTAATGGCCGTCCCTTTGTTTTGCGAGATGTGGAGAGGCCCTTCTCCAACCTTGAGTATACGGGAATTAACAGGGAGAGGGTTGAGCAAATGGAAGCTCGTTTGAAAGAAGACATTCTGGTGGAAGCTGCAAGATATGGAAATAAGATCCTTGTGACTGATGAACTGCCAGATGGGCAGATGGTGGACCAATGGGAGCCCGTGTCAAGTAATTCTGTGAAGACACCACTAGAGGTGTATGAGGAATTGCAAGTGGAGGGATATCTTGTTGATTATGAACGTGTTCCTATAACAGATGAAAAATCACCAAAGGAATTAGATTTTGATATTTTGGTTCGTAAAATTTCTCAAGCCGATATAAATACAGAGATAATTTTTAATTGTCAAATGGGGCGTGGACGAACTACAACTGGAATGGTCATTGCAACTTTGGTCTACCTCAACCGAATTGGGGCCTCTGGGTTTCCAAGAAGCAATTCAATTGGTAGAATTTCTCAGAGTATGGCCAATGTTGCTGATCATTTGCCTAACTCAGAAGAGGCAATTCGCAGAGGAGAATATGCAGTCATAAGAAGCTTGATTCGGGTGTTAGAGGGTGGTGTTGAGGGGAAAAGACAAGTGGACAAAGTCATTGACAAATGTGCTTCAATGCAGAATCTACGTGAAGCAATTGCCACCTATCGCAATAGCATTTTGCGACAGCCAGATGAGATGAAAAGGGAGGCATCACTATCTTTTTTTGTGGAGTACCTGGAGAGATACTACTTTTTAATATGTTTTGCTGTGTACATTCATTCAGAATGGGCTGCACTCTGTTCTAATACTACTGATCACCGTGGTTTTGCTGATTGGATGAGAGCAAGGCCTGAACTCTACAGCATCATTCGCAGGTTACTCAGGAGAGATCCAATGGGTGCACTTGGATATTCAAGTTTGGAACCATCTCTAAAGAAGATAGATGAATCTACTGATGGTCGCCCTTCTGAGATGGGTGTGGTTGCTGCCTTGAGAAATGGGGAGGTTCTTGGCAGTCAGACTGTTCTCAAAAGTGACCATTGTCCTGCATGTGAAAACCCGAGTTTACCTGAGAGAGTGGATGGTGCTCCTAATTTCCGAGAAGTTCCTGGATTTCCAGTTTATGGAGTGGCAAATCCAACCATTGATGGTATCCGATCTGTCATTCGCAGGATTGGTAGCTCTAAAGGTGGACGCCCAATACTTTGGCATAATATGAGAGAAGAGCCTGTTATTTACATCAATGGGAAGCCATTCGTTCTTCGTGAAGTTGAGAGGCCATACAAAAACATGCTGGAGTACACGGGCATTGATCGTGAAAGAGTGGAGAAAATGGAAGCTCGATTAAAAGAAGATATCCTACGGGAAGCTAAACACTATGACGGTGCCATAATGGTTATTCATGAAACAGATGATAAGCATATATTTGATGCTTGGGAGAATGTTACCGCTGACAATGTTCAAACTCCACTTGAAGTTTTCAAAAGTCTGGAAGCTGAGGGATTCCCCATTAAGTATGCGCGTGTGCCTATCACTGATGGAAAAGCTCCTAAAAGCTCTGATTTTGATACTTTAGCAATTAATATTTCTTCTGCTGCAAAGGACACTGCTTTTGTTTTCAATTGTCAGATGGGCAGGGGCAGGACAACCACTGGTACTGTCATAGCTTGCCTTGTGAAACTTAGAATTGATTATGGTAGGCCCATTAAAATACTGGGCGATGATGTGACCCATGAAGAATCAGATGGTGGTTCTTCAAGCGGAGATGAAGCTGGGAGTTATGTCACTCCATTAACCTCCAATACTTTGCAAAGAAAGATAGACGAGAAACAAAATCGTGTTTTTGGCTGTCTTGCGGTACAGAAAACATATCTTGGAAGTGAAGCATTTGATGGATTTTGTGGACAAGGAGAATCCAAAATGACATTTAAGGTTTGGTTGCATCGGAGGCCAGAGGTGCAGGCTATGAAATGGAGCATCAGATTGAGGCCAGGGCGATTTTTCACTGTTCCTGAAGAGTTGAGACAACCACAAGAGTCTCAGCATGGAGATGCAGTGATGGAGGCCATTGTCAAGGCCAGAAACGGTTCTGTTTTGGGGAAAGGCTCTATACTGAAAATGTATTTCTTTCCTGGACAGAGAACTTCCAGTCACATACAAATACATGGTGCACCTCATGTTTACAAGGTTGATGAATACCCTGTGTATTGCATGGCAACTCCAACTATCTCTGGTGCCAAGGAGATGCTAGACTATTTGGGTGCTAAGCCTAAACCTTCCTTAACAGCTCAAAAAGTTATATTGACTGATCTGAGAGAAGAAGCAGTTGTTTATATCAATTATACACCCTTTGTCTTGAGGGAGTTAAACAAACCAGTTAATACACTCAAGTACGTGGGAATCACTGGTCCTGTGGTGGAACACATGGAAGCACGGCTAAAAGAAGATATACTAGCTGAGATTAGACAGTCTGGTGGGCGAATGCTATTACACCGTGAAGAATATAACCCCTCAACAAATCAGTCTGGTGTGGTTGGATACTGGGAAAACATTCGGGCAGATGACGTGAAGACACCTGCGGAAGTTTATTCTGCTCTAAAAGACGATGGATATGATATTGTCTACCAAAGGATACCTTTAACAAGAGAGAGAGATGCTTTGGCCTCTGATGTTGATGCAATACAGTGTTGTCAAGATGACTCTGCAGGTAGTTACCTTTTTGTATCACACACAGGTTTTGGTGGAGTCGCATATGCAATGGCCATCATCTGTATCAGACTTGATGCCCGATCCAAAGTCTCACAGCCATTATTTGGTCCTCATATATATGCAGTGACTGAAGAGAGCTTGCCCTCTCGAACTTCTAATGAAACGACACTTAGTATGGGTGACTATCGTGACATTTTGAACCTTACAAGGGTCCTCATACATGGTCCCCAGAGCAAAGCAGACGTTGACATTGTCATTGAAAGATGTGCAGGTGCAGGGCATATACGAGATGATATTCTTTATTACAATAGAGAATTTGAAAAGTGTACTGATGATGGTGATGAGGAACGTGCATATCTTATGGACATGGGTATCAAGGCTTTGAGGCGATATTTTTTCCTCATCACATTCAGATCTTATCTCTACTGCACCTCTCCTGCCATTATGAAATTTGAAGCATGGATGAAAGCAAGACCGGAGCTTGGTCATCTATTTACAGTTTGCGCCACCTATAGCCTCTCCTCATGCTGTGCAATACATTTTTGCTAA 3555 0.436 MSMIPKEPEQVMKMRGGCVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRQASDSLHVHGVAIPTIHGIRNVLNHIGARFKVLWISLREEPLAYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILVEAARYGNKILVTDELPDGQMVDQWEPVSSNSVKTPLEVYEELQVEGYLVDYERVPITDEKSPKELDFDILVRKISQADINTEIIFNCQMGRGRTTTGMVIATLVYLNRIGASGFPRSNSIGRISQSMANVADHLPNSEEAIRRGEYAVIRSLIRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRNSILRQPDEMKREASLSFFVEYLERYYFLICFAVYIHSEWAALCSNTTDHRGFADWMRARPELYSIIRRLLRRDPMGALGYSSLEPSLKKIDESTDGRPSEMGVVAALRNGEVLGSQTVLKSDHCPACENPSLPERVDGAPNFREVPGFPVYGVANPTIDGIRSVIRRIGSSKGGRPILWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVEKMEARLKEDILREAKHYDGAIMVIHETDDKHIFDAWENVTADNVQTPLEVFKSLEAEGFPIKYARVPITDGKAPKSSDFDTLAINISSAAKDTAFVFNCQMGRGRTTTGTVIACLVKLRIDYGRPIKILGDDVTHEESDGGSSSGDEAGSYVTPLTSNTLQRKIDEKQNRVFGCLAVQKTYLGSEAFDGFCGQGESKMTFKVWLHRRPEVQAMKWSIRLRPGRFFTVPEELRQPQESQHGDAVMEAIVKARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVYKVDEYPVYCMATPTISGAKEMLDYLGAKPKPSLTAQKVILTDLREEAVVYINYTPFVLRELNKPVNTLKYVGITGPVVEHMEARLKEDILAEIRQSGGRMLLHREEYNPSTNQSGVVGYWENIRADDVKTPAEVYSALKDDGYDIVYQRIPLTRERDALASDVDAIQCCQDDSAGSYLFVSHTGFGGVAYAMAIICIRLDARSKVSQPLFGPHIYAVTEESLPSRTSNETTLSMGDYRDILNLTRVLIHGPQSKADVDIVIERCAGAGHIRDDILYYNREFEKCTDDGDEERAYLMDMGIKALRRYFFLITFRSYLYCTSPAIMKFEAWMKARPELGHLFTVCATYSLSSCCAIHFC 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02701 1184 PANTHER METAL ION-BINDING PROTEIN 722 1166 - -
Cca03g02701 1184 PANTHER METAL ION-BINDING PROTEIN 601 716 - -
Cca03g02701 1184 PANTHER METAL ION-BINDING PROTEIN 338 481 - -
Cca03g02701 1184 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 1 336 - -
Cca03g02701 1184 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 722 1166 - -
Cca03g02701 1184 PANTHER METAL ION-BINDING PROTEIN 421 601 - -
Cca03g02701 1184 CDD PTP_paladin 15 308 - -
Cca03g02701 1184 SMART PTPlike_phytase_2 868 1026 - -
Cca03g02701 1184 SMART PTPlike_phytase_2 85 240 - -
Cca03g02701 1184 SMART PTPlike_phytase_2 503 659 - -
Cca03g02701 1184 Pfam Inositol hexakisphosphate 869 1024 - -
Cca03g02701 1184 Pfam Inositol hexakisphosphate 85 239 - -
Cca03g02701 1184 Pfam Inositol hexakisphosphate 503 659 - -
Cca03g02701 1184 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 9 244 IPR029021 -
Cca03g02701 1184 PANTHER METAL ION-BINDING PROTEIN 1 336 - -
Cca03g02701 1184 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 427 660 IPR029021 -
Cca03g02701 1184 CDD PTP_paladin 431 675 - -
Cca03g02701 1184 MobiDBLite consensus disorder prediction 675 694 - -
Cca03g02701 1184 Gene3D Protein tyrosine phosphatase superfamily 805 1036 IPR029021 -
Cca03g02701 1184 Gene3D Protein tyrosine phosphatase superfamily 440 679 IPR029021 -
Cca03g02701 1184 Gene3D Protein tyrosine phosphatase superfamily 24 286 IPR029021 -
Cca03g02701 1184 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 788 992 IPR029021 -
Cca03g02701 1184 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 421 601 - -
Cca03g02701 1184 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 601 716 - -
Cca03g02701 1184 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 338 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02701 Cca-Chr3 48320652 48332382 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02701 - - pmum:103327236 1889.39