Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02699 ATGCTGCGCCTGAAAGCGTTTCGGCCTACGAATGATAAAATCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTGACAGCCGATGATTCAGATCGAGTCTCGGTTTGGAACTGGGAGCACCGCCAGGTGGTGTATGAGTTGAAAGCTGGCGGAGTGGACGAGCGACGTCTGGTCGGCGCCAAGTTGGAGAAGCTGGCCGAGGGAGAAACAGAGTCCAAAGGGAAGCCTACAGAAGCCATTCGGGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGATGATGTACGGTTTTGGCAACTTTGGCATAATCGCTCTGCGGCTGCTGAGGCTCCAACAGCTGTCCACACTTCATCTTTTAACTCTCCTGCCCCATCAACAAAAGGGAGACATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTTTGGACTTGGTGACAATGCGGGGCCGTGATGTACCAAAGCAAGAACTTGATAACAAGTCCCTTCTATGCATGGAGTTCCTTTATAGAACTGGTGTTGGTGATGGTCCTCTTGTTGCTTTTGGTGCATCTGATGGTGTCATTAGGGTTCTCTCAATGTTGACATGGAAGCTTGTGCGAAGGTACACTGGAGGTCATAAAGGATCTATCTCTTGCTTGATGTCCTTCATGGCTGCTTCTGGTGAGGCTCTTCTGGTTTCAGGTGCTAGTGATGGATTACTCATAATTTGGAGTGCTGACCATGGACAGGATTCACGTGAACTTGTACCCAAGCTCAGTTTAAAAGCTCATGATGGAGGGGTTGTGGCAGTTGAGTTGTCAAGGGTTATGGGAGGTGCTCCTCAGCTAATCACAATTGGTGCAGATAAGACATTAGCCATATGGGACACCGTCTCCTTTAAGGAGCTGAGGCGTATAAAGCCAGTTCCCAAATTAGCTTGCCACAGTGTGGCTTCTTGGTGCCATCCTCGAGCTCCAAACCTTGATATTCTAACCTGTGTCAAAGATTCTCACATATGGGCAATTGAACATCCCACTTATTCTGCTCTCACAAGGCCATTGTGTGAATTGACATCAGTTATTCCTCCCCATGCTCTGGCTCCTAATAAGAAACTGAGGGTGTATTGTATGGTTGCACATACTTTGCAGCCACATCTTGTTGCTACTGGAACCAACATTGGTGTTATTATCTGCGAGTTTGATGCCAGATCTCTTCCACCTGTAGCTCCTCTACCAACTCCATCAGACAGTAGAGAGCATTCTGCCATATTTGTAATTGAAAGGGAATTAAAGCTATTAAATTTTCAGTTAAACAACTCAGCAAATCCATCTCTTGGAAATAGCAGCTCCTTGTCAGAAACAGGAAGACCCAAGGGAGATTTTTTTGAACCATTACCTGTCAAGCAGGGGAAGAAGCACATCAGTACTCCTGTTCCACATGATTCCTACTCAGTTCTCTCTGTGAGCAGTTCAGGAAAGTACCTAGCAATTGTTTGGCCAGATATTCCTTATTTCTCTATCTACAAGGTTAGTGATTGGTCAATTGTTGATTCTGGAAGTGCAAGGCTTCTCGCATGGGACACTTGTCGCGATAGATTTGCTATATTGGAATCAGCATTACCTCCTAGAATTCCTATAGTTCCTAAGGGTAGTTCTTCAAGAAGAGCTAGAGAagctgctgcggcacaacaagcagcagcagcagctgctgctgcttccacagcttctGTTCAAGTCCGCATCTTGTTAGATGATGGCACATCAAATATACTAATGAGGTCTGTTGGCACACGCAGTGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGTGTTGCCTATCGAACATCTAGGAGAGTCAGTCCTATTGCTGCTACAGCTATTTCAACAATACAGTCTATGCCCTTATCAGGATATGGAAGCAGTGGTCTTTCTTCTTTTACTACTTATGATGATGGATTATCTTCACACAGACCTCCAACTGAGGCAGCACCTCAAAACTTCCAGCTATACAGTTGGGAGACATTCCAGCCAGTGGGGGGTCTACTTCCTCAGCCAGAATGGACTTCTTGGGACCAAACCGTTGAGTACTGTGCATTTGCATACCAGCAATACATAGTCATTTCTTCATTGCGCCCTCAATATAGATACTTGGGAGATGTTGCAATCCCATATGCTACTAGTGCTGTTTGGCACCGGAGGCAACTGTTTGTGGCTACCCCAACTACTATAGAAATTGTTTTTGTGGATGCTGGGGTTGCTCAAATTGACATTGAAACTAAGAAGATGAAAGAAGAGCAGAAAATGAGAGAAGCACAGGCAAGAGCAGTGGCAGAGCATGGAGAGTTAGCACTAATCACAGTAGAAGGTCCCCAGTCTGCTAATGAAGAAAGAATAGCATTGAGGCCACCCATGTTGCAGGTGGTTCGGTTGGCTTCATTTCAGCATGCTCCTTCAGTGCCACCATTTTTAACGTTACCAAAACAATCTAGAGTTGATAGTGATGACTCTTGGATGGCAACAGAAGAGAGGAAAGCAGGTGAGGTTGCAGTTGGTGGTGGGGGTGTGTCTGTGGCAGTTACTCGATTCCCAATGGAGCAGAAACGTCCAGTTGGGTCTCTTGTGGTTGTAGGTGTCAAGGATGGAGTTCTTTGGCTAATTGACAGGTACATGTGTGCTCATGCCTTATCCTTGAGTCATCCTGGTATTCGTTGCCGATGTCTTGCTGCTTATGGTGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGAAGAGAACACCACGATGATTTAGCACAATTTATGTTAGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCTGGAATATCTAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCAATGATTTGAAAAGAGCTCTTCATTGTCTTCTGACCATGAGTAATAGCCGGGATATAGGAAATGATGGTACTACTGGGCTTGGTTTGAATGACATTCTTAATTTATCAGATAAAAAACCAGATAAATTATCGGATAAAAAACAAGATATAGTTGAAGGTGTTCAGGGTATAGTGAAATTTGCAAAAGAGTTCTTGGATCTTATTGATGCTGCAGATGCTACAGCACAGAGTGAAATTGCCCGTGAGGCTCTCAAGAGGTTAGCTGCAGCAGGTTCAGTGAAAGGTGCTTTAGAAGGTCATGAATTGAGAGGATTAGCATTACGCCTTGCAAATCATGGAGAGTTGACTCGGCTAAGTGGTCTGGTTAACAACTTAGTCACGCTTGGATTGGGACGGGAAGCTGCGTTTGCTGGTGCTGTTTTGGGCGACAATGCTCTTATGGAAAAAGCATGGCAGGATACTGGAATGCTGGCAGAGGCTGTGCTTCATGCTCATGCACACGGACGTCCAACTTTGAAGAACTTAGTTCAGGCATGGAACCAAGCGTTACAGAGAGAGATTGAACCTACTCCATCACAGAAGACAGATGCTGCAGCTGCATTTTTAGCTTCTCTTGAGGAGCCTAAGCTCACAAGTTTGGCAGATGCAGGGAAGAAACCACCTATTGAAATCCTGCCTCCGGGTATGATGTCTCTTAATGCTCCTATTTCCATCCAGAAGAAACCAGGTTCTGCTGCACAGAATTCCCAACAGCCCCCAGGCAAGCCATTATTGGCTCTGGAAGCACCTCCTACGACAACAGCCGCACCGGAGAGCGCTCCACAGCAGCCTGAAGCTGCACCTGCATCAGTTGGTGATCCACCTCCATCAGAGCCTACCTCAGATTCCACGCCAGCTCCTGCAGCTGCTCCACCTCAACCAGAATCAGGTGAAACCACCGCAGATGCTGCTGCTCCTACCTCTACACCAGCAAGTGATGGAGATCCAAATGTTAACAGTGAAACTGTTGAAGCAGCGTCTACCAGCAATCCAGCACCACCAGAGATTCCCCCAGCACCAGTACCAGAGGTTGCAGAGACTACTGTTCCAACTTCAACAACAGCCCCAAGTCAAACTACAGTTCCTGCGAGTGACCCACTTATATAA 4026 0.4528 MLRLKAFRPTNDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVVYELKAGGVDERRLVGAKLEKLAEGETESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHTSSFNSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRTGVGDGPLVAFGASDGVIRVLSMLTWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVIPPHALAPNKKLRVYCMVAHTLQPHLVATGTNIGVIICEFDARSLPPVAPLPTPSDSREHSAIFVIERELKLLNFQLNNSANPSLGNSSSLSETGRPKGDFFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSIYKVSDWSIVDSGSARLLAWDTCRDRFAILESALPPRIPIVPKGSSSRRAREAAAAQQAAAAAAAASTASVQVRILLDDGTSNILMRSVGTRSEPVIGLHGGALLGVAYRTSRRVSPIAATAISTIQSMPLSGYGSSGLSSFTTYDDGLSSHRPPTEAAPQNFQLYSWETFQPVGGLLPQPEWTSWDQTVEYCAFAYQQYIVISSLRPQYRYLGDVAIPYATSAVWHRRQLFVATPTTIEIVFVDAGVAQIDIETKKMKEEQKMREAQARAVAEHGELALITVEGPQSANEERIALRPPMLQVVRLASFQHAPSVPPFLTLPKQSRVDSDDSWMATEERKAGEVAVGGGGVSVAVTRFPMEQKRPVGSLVVVGVKDGVLWLIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALHCLLTMSNSRDIGNDGTTGLGLNDILNLSDKKPDKLSDKKQDIVEGVQGIVKFAKEFLDLIDAADATAQSEIAREALKRLAAAGSVKGALEGHELRGLALRLANHGELTRLSGLVNNLVTLGLGREAAFAGAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQALQREIEPTPSQKTDAAAAFLASLEEPKLTSLADAGKKPPIEILPPGMMSLNAPISIQKKPGSAAQNSQQPPGKPLLALEAPPTTTAAPESAPQQPEAAPASVGDPPPSEPTSDSTPAPAAAPPQPESGETTADAAAPTSTPASDGDPNVNSETVEAASTSNPAPPEIPPAPVPEVAETTVPTSTTAPSQTTVPASDPLI 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02699 1341 Gene3D - 3 349 IPR015943 GO:0005515
Cca03g02699 1341 MobiDBLite consensus disorder prediction 1193 1341 - -
Cca03g02699 1341 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Cca03g02699 1341 PANTHER BNAC07G49640D PROTEIN 1 1328 - -
Cca03g02699 1341 MobiDBLite consensus disorder prediction 1319 1341 - -
Cca03g02699 1341 MobiDBLite consensus disorder prediction 1241 1265 - -
Cca03g02699 1341 MobiDBLite consensus disorder prediction 1273 1302 - -
Cca03g02699 1341 SMART WD40_4 198 241 IPR001680 GO:0005515
Cca03g02699 1341 SMART WD40_4 1 39 IPR001680 GO:0005515
Cca03g02699 1341 SMART WD40_4 250 292 IPR001680 GO:0005515
Cca03g02699 1341 PANTHER TSET COMPLEX MEMBER TSTF 1 1328 - -
Cca03g02699 1341 SUPERFAMILY WD40 repeat-like 5 494 IPR036322 GO:0005515
Cca03g02699 1341 MobiDBLite consensus disorder prediction 1197 1214 - -
Cca03g02699 1341 Gene3D - 903 1160 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02699 - - gmx:100786844 2335.45