Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02678 ATGAAGACGAGTAGCAGCAACTCCAACGCACCCGTTGATCTATGGTCAGAAATCCTGGCCGCTGAAACCCCACGCCCCCAACAAATCGGCGTCGTTTACAGCCGGAGAAACCCAAACCCTCGCAACCATCCCAACCAACAACCTTCAGACCCTGCTCTTCCTTGTTCCACTCGGGTCAGTTTGGCCGATCCTAACAAGCGAGTCAGTTGGAATCGTTCCCTCTCCACCAGAGGGAGGACAAGTATAGCCGTTGGTGCTTGCATGGTTTATCAGCCTGGGTTAAAGAAGGACAAAAGGAAACCAAAACCCCCTCTTCCCAAAGGAAAGCTTGTGCAACCTCCAAACTTTGAGAAGGAGAGGTTATACTTTCAAGAGGTTGATGCTTTTGAGTTGTTGGAGGAAAGTCCCTCACCCAAGAAAGTTGGGACATGGATCACAGGAAATATGACAGAAGAGGGACCAATACCAGCTATAAGCTCCAGATTAGAAAAATGGTTACACTCTAGAAGGTTAAATCCTATCTGTGGTTCCTCTAGCACACTGTCCAAGATACTGGAGGCCCCATCCACACGTATGGAAACTATTTGTGATCTTGATCTCAATGCTTCTGAATTGAGAACATTGGAACGAACGGAGGGAAGCAATTCACTATTACATTCCGCCCAAACTGGTGACAAGAAAAGTTTTATTGAGAATGACCTTCATTTGCAAACAAATGATAGGATGCTGGCGGCTCAAAGTGGTGAAGGGTGTGAAGATATTGAAGCTGCTGTCAAGAAGCTCTCTCTGGTATCAACGTTGTCTTCAATAGATGATGACCACATTAGTCCATTTTCTGCTCTATTATCGATTTGTGGACAGTCTGCACCTTCAGCGTTTCAAGATGTTTTCTCTAGTGTCTCAGATACTATTGTGAAAGTTGGTGAAGGAACATTTGGAGAAGCTTTCAAGGTTAATAATTATGTCTGCAAAATAGTTCCTTTTGATGGGGACTTCAGAGTGAACGGTGAAGTCCAAAAGACATCCGAAGAGCTGCTTGAGGAGGTGCTTCTTTGCAAAACTCTCAACCAATTGAGAGGAAAAGATGGAGATTCTGATAATTTATGCAGCGCATTCATAGATTGCGTAGAATTTAGAGTATGTCAGGGCTCTTATGATGCGGCACTAATTCGAGCATGGGAAGATTGGGATCTTAAGCATGGCTCAGAGAATGATCATCCAAAAGAGTTCCCAGATAAACAGTGTTACGTGGTGTTCGTACAACAACATGGTGGCAAGGATCTTGAAAGTTTTGCCCTCCTGAATTTTGACGAGGCAAGGACTTTACTGGTCCAGGTTACGGCTGGGCTTGCTGTGGCTGAGTCTGCTTATGAATTCGAACATCGAGATCTTCACTGGGGAAATATACTTATCGGACGAAGTGATTCTGAAACGTTGCAGTTCACTCTTGATGGCAAGAATATGTTAGTCAAAACGTATGGTTTAATAATATCAATAATTGACTTCACTTTATCTAGAATAAACACAGGTGATAGAATACTGTATTTAGATCTTTCTTCTGATCCTGACCTATTTAAAGGACCAAAAGGGGACAAACAGTCAGAAACATACCGGAGGATGAAGGAGGTGGCTGAAGATTGGTGGGAAGGAAGTTATCCCAAGACAAACGTATTATGGTTGATCTACTTGGTAGACATACTCCTTATAAAGAAATCATTTGAACGTACTACAAAGCACGAGAGAGATCTACGCTCCTTGAAGAAGCGTCTTGACAAGTATGATTCGGCCAAGGAAGCAATTCTTGATCCCTTCTTCACTGATTTGTTCCTTGAGTCTGACCCAAAGGCTTAA 1851 0.4338 MKTSSSNSNAPVDLWSEILAAETPRPQQIGVVYSRRNPNPRNHPNQQPSDPALPCSTRVSLADPNKRVSWNRSLSTRGRTSIAVGACMVYQPGLKKDKRKPKPPLPKGKLVQPPNFEKERLYFQEVDAFELLEESPSPKKVGTWITGNMTEEGPIPAISSRLEKWLHSRRLNPICGSSSTLSKILEAPSTRMETICDLDLNASELRTLERTEGSNSLLHSAQTGDKKSFIENDLHLQTNDRMLAAQSGEGCEDIEAAVKKLSLVSTLSSIDDDHISPFSALLSICGQSAPSAFQDVFSSVSDTIVKVGEGTFGEAFKVNNYVCKIVPFDGDFRVNGEVQKTSEELLEEVLLCKTLNQLRGKDGDSDNLCSAFIDCVEFRVCQGSYDAALIRAWEDWDLKHGSENDHPKEFPDKQCYVVFVQQHGGKDLESFALLNFDEARTLLVQVTAGLAVAESAYEFEHRDLHWGNILIGRSDSETLQFTLDGKNMLVKTYGLIISIIDFTLSRINTGDRILYLDLSSDPDLFKGPKGDKQSETYRRMKEVAEDWWEGSYPKTNVLWLIYLVDILLIKKSFERTTKHERDLRSLKKRLDKYDSAKEAILDPFFTDLFLESDPKA 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02678 616 MobiDBLite consensus disorder prediction 93 112 - -
Cca03g02678 616 Gene3D Phosphorylase Kinase; domain 1 290 422 - -
Cca03g02678 616 SMART DUF3635_2 522 605 IPR024604 -
Cca03g02678 616 Gene3D Transferase(Phosphotransferase) domain 1 424 605 - -
Cca03g02678 616 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 68 610 - -
Cca03g02678 616 SMART serkin_6 301 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02678 616 Pfam Haspin like kinase domain 275 598 - -
Cca03g02678 616 ProSiteProfiles Protein kinase domain profile. 301 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02678 616 MobiDBLite consensus disorder prediction 30 54 - -
Cca03g02678 616 MobiDBLite consensus disorder prediction 26 56 - -
Cca03g02678 616 PANTHER SERINE/THREONINE-PROTEIN KINASE HASPIN 68 610 - -
Cca03g02678 616 SUPERFAMILY Protein kinase-like (PK-like) 306 511 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02678 Cca-Chr3 48075557 48082012 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02678 K16315 - gmx:100790036 1018.84