Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02675 ATGGGAGGTTGTAAGGCGCCTATAACTACTTTCATTGTTGAACCGTTTGTTCCTCACGACCAAGAGTATTATCTCTCCGTTGTTTCTGAGAGGCTGGGCTCCACCATCAGCTTCTCCGAATGCGGGGGCATTGAAATCGAAGAGAACTGGGATAAGGTTAAAACTATATTCCTTCCGACAGAAAAGCCGCTGACTCCAGAGGCATGTGCGCCGTTGATTGCTACACTTCCTTTGGAGATTCGCGGGAAAATTGGTCATTTCATAATGGGTGTGTTTGCTGTCTTCCAAGATCTGGACTTCAGTTTTCTAGAGATGAATCCATTTACACTGGTGAATGAAAAGCCATATCCATTGGATATGAGAGGGGAATTGGATGACACTGCTGCATTCAAGAACTTCAACAAGTGGGGTAATATAGAGTTTCCGTTGCCTTTCGGAAGAGTTCTGAGCCCTACAGAAAGCTTTATTCATTCCTTGGATGATAAGACAAGTGCATCATTGAAATTTACTGTATTGAATCCAAAAGGACGCATCTGGACAATGGTAGCAGGAGGCGGTGCAAGCGTAATTTATGCTGATACTGTTGGAGATTTAGGCTATGCATCAGAGCTTGGCAACTATGCTGAGTATAGTGGAGCTCCAAATGAGGAGGAGGTGTTGCAGTATGCGAGAGTCGTAATTGATTGTGCTACTGCGGATCCTGATGGCCGTAAGAGAGCCCTTCTTATTGGAGGTGGCATTGCAAACTTCACTGATGTTGCTGCCACATTTAGCGGGATTATTCGAGCCCTGAAAGAAAAGGAATCAAAACTTAAAGCAGCGCGAATGCACATCTATGTCAGAAGAGGTGGTCCAAACTATCAGACTGGTTTGGCAAAGATGCGTGCATTGGGGGAGGAATTGGGAGTACCAATTCAGGTTTATGGGCCGGAGGCTACAATGACCGGCATCTGCAAACAGGCTATTGATTGCATCATGTCTAAAGCATAA 990 0.4515 MGGCKAPITTFIVEPFVPHDQEYYLSVVSERLGSTISFSECGGIEIEENWDKVKTIFLPTEKPLTPEACAPLIATLPLEIRGKIGHFIMGVFAVFQDLDFSFLEMNPFTLVNEKPYPLDMRGELDDTAAFKNFNKWGNIEFPLPFGRVLSPTESFIHSLDDKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALKEKESKLKAARMHIYVRRGGPNYQTGLAKMRALGEELGVPIQVYGPEATMTGICKQAIDCIMSKA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02675 329 SUPERFAMILY Succinyl-CoA synthetase domains 165 309 IPR016102 -
Cca03g02675 329 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 142 - -
Cca03g02675 329 Pfam ATP-grasp domain 9 109 IPR013650 -
Cca03g02675 329 Gene3D - 1 139 - -
Cca03g02675 329 Pfam ATP citrate lyase citrate-binding 147 323 IPR032263 -
Cca03g02675 329 Gene3D - 146 328 IPR016102 -
Cca03g02675 329 PANTHER ATP-CITRATE SYNTHASE 1 328 - -
Cca03g02675 329 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02675 Cca-Chr3 48041939 48046133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02675 1 326 Acyl Lipid Metabolism Gene Families AT1G09430 89.877 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02675 K01648 - gmx:100787551 642.884