Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02669 ATGTCAGCGTGTTTCTCTTCAACCTCGGTTCCGTTCTCGGAATCTTCATTCGCATTTTCAAGACCAGCACCTCTTTGCTCAAATTCAATTACCGTTTCATCGAATAACTTTCATTCAGTGACAGGTGGTGGTCGTCTTCTACTGAATGTTGGAGGCACAAGTTTGTGTCGGAGGCTTCGTGGTTTCAAACTGTGGATACTTGAGAGACTCAATTTCCAATTCCAAACACCTAAGCAACCTAAGAATAGAAATATCTTCAAAAATAATTTGGAAAATACAGGTTTATCAAATGAAAAGGAATCGGTTTCTGGTTCATCTTCAATTCTTCGTGGGCCTGATGATAAGGTTATTCCCATGGAGTCTCCATCTTTGCTGCAGACAGGTTTGTCTGGTACTTCCATGGATTTTAGCAGAAAACCCTCACTTTGCATTGTTGTCATAGGAGCCACTGGCGAGCTGGCAAAGAGGAAGATTTTCCCTGCTTTATTTGCTCTCTATTACAGTGGCTTTCTTCCTGAGAATGTAGGCATTTTTGGGTATTCAAGGAAGGATATAACTGATGAAGACTTGCGATCTATTATAGCTTCAACATTAACATGCCGAGTTGATCATCAAGAGAACTGTGAGGACAAATTAGATGCTTTCCTTAGTAGAACATATTATATTAATGGAGGCCATGACAATAAATCAGGGATGTCCATGCTGAATGCACGAATGGATCAAATTGAGGGAGGATCCAAAACTAACAGGATATTCTACCTCTCTGTGCCACAAGAAGCACTTTTGGATGTTGCATCATGTCTTGCAAGCAGTGTTCAGACCCAAAAAGGATGGAACCGCATAATATTTGAGAAACCATTTGGTTTTGATGCACTTTCTTCCCACAGGATGACACAGTATCTTCTTTCAAACTTTCAGGAAAAACAAATATATAGGATTGATCATCTTCTAGGAAGGAATCTCATTGAAAATCTCACAGTTTTAAGGTTTTCAAATCTAGTTTTTGAGCCGCTTTGGAGTCGAACTTACATACATAATGTACAGGTCAGCCCCCTTTCCTTTGTTACCCGATACCCATGCAGATATTTCAGTGGCTATGGGATTATCCGTGATATTGTTCACAGTCATGTGCTCCAAACAATTGCATTGCTTGCCATGGAACCACCCATAAGCCTTGATGGAGAAGATATTCGAAATGAAAAGGTCAAGGTTTTGAGGTCGATTCGCAAATTGGAGCCTAAGGATGTCATTCTTGGCCAATATAAAGCAAGTGGTGGAGACAAAGTTGATGCATGCTTAAATGGTCTGACACCTACTTATTTTGCTGCTGCATTATACATTGACAATGCACGCTGGGATGGCGTGCCATTTTTGATTAAAACAGGCTTGGGACTCATCAAACACCAGTAA 1410 0.405 MSACFSSTSVPFSESSFAFSRPAPLCSNSITVSSNNFHSVTGGGRLLLNVGGTSLCRRLRGFKLWILERLNFQFQTPKQPKNRNIFKNNLENTGLSNEKESVSGSSSILRGPDDKVIPMESPSLLQTGLSGTSMDFSRKPSLCIVVIGATGELAKRKIFPALFALYYSGFLPENVGIFGYSRKDITDEDLRSIIASTLTCRVDHQENCEDKLDAFLSRTYYINGGHDNKSGMSMLNARMDQIEGGSKTNRIFYLSVPQEALLDVASCLASSVQTQKGWNRIIFEKPFGFDALSSHRMTQYLLSNFQEKQIYRIDHLLGRNLIENLTVLRFSNLVFEPLWSRTYIHNVQVSPLSFVTRYPCRYFSGYGIIRDIVHSHVLQTIALLAMEPPISLDGEDIRNEKVKVLRSIRKLEPKDVILGQYKASGGDKVDACLNGLTPTYFAAALYIDNARWDGVPFLIKTGLGLIKHQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02669 469 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 111 469 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca03g02669 469 PRINTS Glucose-6-phosphate dehydrogenase signature 355 372 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca03g02669 469 PRINTS Glucose-6-phosphate dehydrogenase signature 304 332 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca03g02669 469 PRINTS Glucose-6-phosphate dehydrogenase signature 451 469 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca03g02669 469 PRINTS Glucose-6-phosphate dehydrogenase signature 373 389 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca03g02669 469 PRINTS Glucose-6-phosphate dehydrogenase signature 280 293 IPR001282 GO:0006006|GO:0016614|GO:0050661
Cca03g02669 469 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 327 466 IPR022675 GO:0004345|GO:0006006|GO:0050661
Cca03g02669 469 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 314 465 - -
Cca03g02669 469 Gene3D - 138 312 - -
Cca03g02669 469 Gene3D Dihydrodipicolinate Reductase; domain 2 314 469 - -
Cca03g02669 469 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 145 324 IPR022674 GO:0006006|GO:0016614|GO:0050661
Cca03g02669 469 PANTHER INACTIVE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 4, CHLOROPLASTIC 111 469 - -
Cca03g02669 469 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 136 327 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02669 Cca-Chr3 47982111 47990367 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02669 K00036 - gmx:100796541 793.112